PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g743440.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

LBD

Protein Properties

Length: 331aa MW: 36887.3 Da PI: 8.636

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g743440.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	111.3	7.1e-35	128	223	6	100
DUF260 6 kvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 +lrrkC k+C++apyf +eq +++fa+vhk+FGasn +kll ++p+++r da+ +l+yeA ar+rdPvyG+v++i++lqqq+ +l+aela++ Pd.00g743440.m01 128 EFLRRKCIKGCIFAPYFDSEQgTAHFAAVHKVFGASNASKLLLRIPPHKRLDAVVTLCYEALARVRDPVYGCVSHIFTLQQQVVNLQAELAYV 220 689**************9989*******************************************************************9 PP DUF260 98 kee 100 +++ Pd.00g743440.m01 221 QAR 223 976 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MVRPQSTAKT QVIEIGHACE GVHEPKIEDR RRHHQHRQLI MDLNRYCLLR TDGGVDHAAP 60 GVAPPKSKYV SNAAVDRISK PGLSLVAYGD DSVEPLVDRD VKKKLGDIAG SEHLVHRRKM 120 SSALLRVEFL RRKCIKGCIF APYFDSEQGT AHFAAVHKVF GASNASKLLL RIPPHKRLDA 180 VVTLCYEALA RVRDPVYGCV SHIFTLQQQV VNLQAELAYV QARLATLQRT PPPPPLPQLE 240 CPPPPRSLHY SSSHINVTSS PCSEFVPTSN LLTHFDPLQT VPHTAEMTSL FNSLDQELID 300 GEDLQALARE FVCRYLPGVR LNKPSTSHQN F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45410.1	3e-62	LBD family protein