PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g743260.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 442aa MW: 47665.3 Da PI: 9.7813

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g743260.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	70.9	1.5e-22	110	155	1	46
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskees 46 d epgrCrRtDGKkWRC ++v++++k+C+ H+hrgr+rsrk++e+s Pd.00g743260.m02 110 DHEPGRCRRTDGKKWRCNKNVVPDQKYCQQHMHRGRQRSRKPVENS 155 679***************************************9985 PP
2	WRC	63.9	2.3e-20	322	363	2	43
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrksk 43 epgrCrRtDGKkWRC+r+vl+ +k+C H+hrg +r+ k + Pd.00g743260.m02 322 LEPGRCRRTDGKKWRCRRDVLPHQKYCGQHIHRGAKRQMKDF 363 59************************************9976 PP
3	QLQ	55.6	1.6e-19	43	77	3	37
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +Ta+Ql++L++Q+l+yK++aan+PvP +L+++++k Pd.00g743260.m02 43 LTATQLHELEQQALIYKHFAANLPVPFHLVLPVWK 77 7********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MEEEGGGKVK LGLGIGVDCY GDDHNGTEEV VGKKKKKYGG GGLTATQLHE LEQQALIYKH 60 FAANLPVPFH LVLPVWKSVA ASFGSSNAAA INRQYPSFVG FSATGFDYRD HEPGRCRRTD 120 GKKWRCNKNV VPDQKYCQQH MHRGRQRSRK PVENSEVASP SSTKTPKNSE GELGNSKTNL 180 QISTPKGLQL MAQSYNYVSV SQGTTMASSG YHECKKNIRP VTTTSIANIP ANRSASTNPA 240 AVATTTIAGP TTATNSSTNE NSLNIGVKYN SSNHADGNCM IRGSSMNVVN VSPGLGFSPK 300 SVLQALLGCN GLYFDNGSGV ELEPGRCRRT DGKKWRCRRD VLPHQKYCGQ HIHRGAKRQM 360 KDFQPVAVPS SSAAAMNTAR LSQTTAICRK TNCAIPNTNL SISIPANPPL GRNDERSNSS 420 RDSDTTLTDT SLTACDSSYV SS

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MEEEGGGKVK LGLGIGVDCY GDDHNGTEEV VGKKKKKYGG GGLTATQLHE LEQQALIYKH  60
FAANLPVPFH LVLPVWKSVA ASFGSSNAAA INRQYPSFVG FSATGFDYRD HEPGRCRRTD  120
GKKWRCNKNV VPDQKYCQQH MHRGRQRSRK PVENSEVASP SSTKTPKNSE GELGNSKTNL  180
QISTPKGLQL MAQSYNYVSV SQGTTMASSG YHECKKNIRP VTTTSIANIP ANRSASTNPA  240
AVATTTIAGP TTATNSSTNE NSLNIGVKYN SSNHADGNCM IRGSSMNVVN VSPGLGFSPK  300
SVLQALLGCN GLYFDNGSGV ELEPGRCRRT DGKKWRCRRD VLPHQKYCGQ HIHRGAKRQM  360
KDFQPVAVPS SSAAAMNTAR LSQTTAICRK TNCAIPNTNL SISIPANPPL GRNDERSNSS  420
RDSDTTLTDT SLTACDSSYV SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45480.1	8e-41	GRF family protein