PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g742860.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 296aa MW: 31625.8 Da PI: 7.869

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g742860.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.7	3.5e-37	58	161	2	104
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..... 88 a+k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ +++ +++ Pd.00g742860.m01 58 APKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsVNGA-------LKIPtsapv 143 799*************************************************************9999855521111.......122211222 PP TCP 89 .kaaksaa.kskksqksa 104 + ++ + k+k++++s+ Pd.00g742860.m01 144 pRPGEDPPdKKKRKRNSN 161 222222222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MTMTEKRELE PDQATTSVDL RINGGEESDS EEPAGPSQAL MLAPKDERDV AMPVAVHAPK 60 RASTKDRHTK VEGRGRRIRM PATCAARIFQ LTRELGHKSD GETIRWLLEH AEPAIIAATG 120 TGTVPAIAMS VNGALKIPTS APVPRPGEDP PDKKKRKRNS NSEYVDLNDG VSASAGLAPL 180 TTERHHQLPP TAAVQAVVPQ GVLPMWAIPS NGVVPGAFFM VPSSSTQPHI FTFPTTVAAA 240 PFINISARPI SSFVGPSSAS ATTHMAASTA PQTLRDFSLE IYDKKELQFM SGSSNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	2e-81	TCP family protein