PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g738770.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 468aa MW: 53043.3 Da PI: 4.6653

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g738770.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	83.3	2.3e-26	298	348	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +k +s e++s+yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk++sl Pd.00g738770.m01 298 SKMLSRETISNYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLASL 348 57899*******************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MAEKTVSELA ETNSETAAAA EDMELEASEP APAEKPDEGT DGEAEAEANA KRLRDEEGSE 60 GNDAVAKKTK VEKSPEEERL EKLGEGKESG RVSLGPKSFG SSVEMFDYFY KLLHYWPTDL 120 SVNKYEHLVL LDLLKKGHAE PDKKIGGGVH AFQVRTHPLY KSSGMNGYAP FDWQYEWTLP 180 LVQDSFHDAA VPFMDQSCLN LDPLYSSLDI QPIRSVFQDD EIVLGNGNGV CNDLFSELME 240 PSNNQQKQIQ HQPPLLMCKN EENGSAENEL EEETKVISKR SHLSTRLRSS NSTSLNSSKM 300 LSRETISNYF YMPITQAAKE LNVGLTLLKK RCRELGIRRW PHRKLASLQT LIRNIQELGK 360 EGEESEEKLR NAIELLERER KLLEEVPDMQ LEDNTKRLRQ ACFKANYKKR KIMGMNNMDQ 420 SQSSFICSNN EIHEYASIMD DGYEEDEEIK SLLSDSFSSS NSNNICLF

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MAEKTVSELA ETNSETAAAA EDMELEASEP APAEKPDEGT DGEAEAEANA KRLRDEEGSE  60
GNDAVAKKTK VEKSPEEERL EKLGEGKESG RVSLGPKSFG SSVEMFDYFY KLLHYWPTDL  120
SVNKYEHLVL LDLLKKGHAE PDKKIGGGVH AFQVRTHPLY KSSGMNGYAP FDWQYEWTLP  180
LVQDSFHDAA VPFMDQSCLN LDPLYSSLDI QPIRSVFQDD EIVLGNGNGV CNDLFSELME  240
PSNNQQKQIQ HQPPLLMCKN EENGSAENEL EEETKVISKR SHLSTRLRSS NSTSLNSSKM  300
LSRETISNYF YMPITQAAKE LNVGLTLLKK RCRELGIRRW PHRKLASLQT LIRNIQELGK  360
EGEESEEKLR NAIELLERER KLLEEVPDMQ LEDNTKRLRQ ACFKANYKKR KIMGMNNMDQ  420
SQSSFICSNN EIHEYASIMD DGYEEDEEIK SLLSDSFSSS NSNNICLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	1e-38	Nin-like family protein