PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g737080.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 611aa    MW: 70233.3 Da    PI: 7.6289
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g737080.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3841.7e-1172396093374
              GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                       +lL++cA+av+s d++ a++lL+++++++sp+gd+ +Rla+yf+ +L+arla++ +  y+ l + +t+    +e l+a++l++  +P+ k+ h
  Pd.00g737080.m02 239 TLLTQCAQAVASYDQRTASELLKQIRKHSSPYGDAAERLAHYFADGLEARLAGTRTPSYSPLLSIQTP---AAEILKAYQLYVTHCPYKKMLH 328
                       69***************************************************999999999888888...8********************* PP

              GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                       +  N++I++ +e+++r+HiiDf+is+G+QWp+++q L++Rp+gpp++R+T+++ p++g   +e++eetg+rL k+A++++vpf+++v +a+++
  Pd.00g737080.m02 329 FFSNRTIMKLAEKATRLHIIDFGISYGFQWPCFIQRLSKRPGGPPNIRMTAIELPQPGfrPTERVEETGRRLDKYAKRFNVPFQYKV-IAQKW 420
                       *********************************************************9****************************9.7**** PP

              GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
                       e++++e+L+++++E ++Vn++++l++++de+v  +s+rd+vLkl+k+++P++ ++   +  +ns+ Fl+rf eal ++s+ fd++ea++pre+
  Pd.00g737080.m02 421 ETIQFEDLKIDRDELIVVNCMHRLKHIPDETVMASSPRDTVLKLIKRINPDLYIHGVINGAYNSPFFLTRFREALFHFSSQFDMFEATIPRED 513
                       ********************************************************************************************* PP

              GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvS 371
                       e+r + E++++g++i+nv+aceg er+er et+++W+ r ++aGFk++pl+++  k++k++l+ ++  + +r++e+ +++++gWk+r ++ + 
  Pd.00g737080.m02 514 EQRLMFEKAVFGKDIMNVIACEGLERVERPETYKQWQVRYQRAGFKQLPLDQELLKTVKTMLKVMGyHNDFRIDEDGHWMLQGWKGRIIMGLA 606
                       ****************************************************************999999*********************** PP

              GRAS 372 aWr 374
                       +W+
  Pd.00g737080.m02 607 FWK 609
                       **7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 611 aa     Download sequence    
MLQDCLALQA AEKSFYDVLN QKDPPSPNQP PLSDHQSFEN SDDDSTHSCH RSNDYRAEKT  60
DWVSDSSETS HVQSSLVESP PDTLLASDSL YGNFGGVVEA RKLLPNENFG IIDFEKYQFM  120
SQGPNTLFRN LASKRENDGY NSTNRSKEKK NHEREDGDYA EEGRSNKQSA ASADDSEPQE  180
MFDKVLLCSV NHESESCSHD EPLKNEGSGK LKLNKQSKGS KTARSKKQNN KREVVDFSTL  240
LTQCAQAVAS YDQRTASELL KQIRKHSSPY GDAAERLAHY FADGLEARLA GTRTPSYSPL  300
LSIQTPAAEI LKAYQLYVTH CPYKKMLHFF SNRTIMKLAE KATRLHIIDF GISYGFQWPC  360
FIQRLSKRPG GPPNIRMTAI ELPQPGFRPT ERVEETGRRL DKYAKRFNVP FQYKVIAQKW  420
ETIQFEDLKI DRDELIVVNC MHRLKHIPDE TVMASSPRDT VLKLIKRINP DLYIHGVING  480
AYNSPFFLTR FREALFHFSS QFDMFEATIP REDEQRLMFE KAVFGKDIMN VIACEGLERV  540
ERPETYKQWQ VRYQRAGFKQ LPLDQELLKT VKTMLKVMGY HNDFRIDEDG HWMLQGWKGR  600
IIMGLAFWKP A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein