PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g737070.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 422aa    MW: 48816.3 Da    PI: 9.4216
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g737070.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS378.39.7e-116494182372
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL+ecA+av s d++ a++lL+++++++sp+g ++qRla+yf+e+L+arl++  s  y+ l   +ts   ++e l+a+++++ ++P+ k+ 
  Pd.00g737070.m01  49 CKLLTECAQAVGSYDQQSASELLKQIRQHSSPYGYATQRLAHYFAEGLEARLSGVRSLSYQPLLFMHTS---TTEFLKAYQVYVSACPFKKMF 138
                       589***************************************************777778777777776...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       h+ aN++I++ +e+++r+HiiDf+is+GlQW++L+q+L+++++gpp+lRiT+++ p++g   +e++eetg+rLak+ ++  vpfe+nv +ak+
  Pd.00g737070.m01 139 HFFANRTIMKQTEKATRLHIIDFGISYGLQWACLIQSLSEKTGGPPNLRITAIELPQPGfrPAERIEETGRRLAKYSKRYSVPFEYNV-IAKK 230
                       **********************************************************9****************************9.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +e+++leeL+++++E+++Vn++++l++++de+v ++++rd+vL+l+k+++P+++ +   +  +n++ F++rf + l ++ alfd++ea++pr+
  Pd.00g737070.m01 231 WETIRLEELQIDRNEVIVVNCMHRLKQIPDETVMMNNPRDAVLNLIKRINPDLFMHGVVNGTYNAPAFVTRFKQLLFHFHALFDMYEATVPRD 323
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsv 370
                       +e+r   Ere++g +ivnv+aceg er+er et+++W++r  +aGFk++pl+ +  k++k++ ++++  + + +e++ +++++gWk+r ++++
  Pd.00g737070.m01 324 NEHRLLFEREIFGTDIVNVIACEGLERVERPETYKQWQARYVRAGFKQLPLDRELLKKMKTMSKMMGyHKDFGIEDDGEWMLQGWKGRIIIAL 416
                       ******************************************************************99999********************** PP

              GRAS 371 Sa 372
                       Sa
  Pd.00g737070.m01 417 SA 418
                       98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MNPESESCFH DESLNAEGTR KLQHNKQSKG SKTTCSKKPN SNRQVVDLCK LLTECAQAVG  60
SYDQQSASEL LKQIRQHSSP YGYATQRLAH YFAEGLEARL SGVRSLSYQP LLFMHTSTTE  120
FLKAYQVYVS ACPFKKMFHF FANRTIMKQT EKATRLHIID FGISYGLQWA CLIQSLSEKT  180
GGPPNLRITA IELPQPGFRP AERIEETGRR LAKYSKRYSV PFEYNVIAKK WETIRLEELQ  240
IDRNEVIVVN CMHRLKQIPD ETVMMNNPRD AVLNLIKRIN PDLFMHGVVN GTYNAPAFVT  300
RFKQLLFHFH ALFDMYEATV PRDNEHRLLF EREIFGTDIV NVIACEGLER VERPETYKQW  360
QARYVRAGFK QLPLDRELLK KMKTMSKMMG YHKDFGIEDD GEWMLQGWKG RIIIALSALK  420
PA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-158GRAS family protein