PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g737060.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 887aa    MW: 99270.9 Da    PI: 4.9361
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g737060.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS337.13.2e-1033076223320
              GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                       +lL++cA+av+s d++ a++lL+++++++sp+gd+++Rla+yf+ +L+arla++ +  y+ l + +t+    +e l+a++l++  +P+ k+ h
  Pd.00g737060.m01 307 TLLTQCAQAVASYDQRTASELLKQIRKHSSPYGDATERLAHYFADGLEARLAGTRTPPYSPLLSIQTP---AAEILKAYQLYVTHCPYKKMLH 396
                       69***************************************************999999999888888...8********************* PP

              GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                       +  N++I++ +e+++r+HiiDf+is+G+QWp+++q L++Rp+gpp++R+T+++ p++g   +e++eetg+rL k+A++++vpf+++v +a+++
  Pd.00g737060.m01 397 FFSNRTIMKLAEKATRLHIIDFGISYGFQWPCFIQRLSKRPGGPPNIRMTAIELPQPGfrPTERVEETGRRLDKYAKRFNVPFQYKV-IAQKW 488
                       *********************************************************9****************************9.7**** PP

              GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
                       e++++e+L+++++E ++Vn++++l++++de+v  +s+rd+vLkl+k+++P++ ++   +  +ns+ Fl+rf eal ++sa fd++ea++pre+
  Pd.00g737060.m01 489 ETIQFEDLKIDRDELIVVNCMHRLKHIPDETVMASSPRDTVLKLIKRINPDLYIHGVVNGAYNSPFFLTRFREALFHFSAQFDMFEATIPRED 581
                       ********************************************************************************************* PP

              GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerle 320
                       e+r + E++++g++i+nv+aceg er+er et+++W+ +++
  Pd.00g737060.m01 582 EQRLMFEKAVFGKDIMNVIACEGLERVERPETYKQWQVAFS 622
                       *************************************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 887 aa     Download sequence    
MDTLLERLSV TKEKFHFGHG SIPVHSNQNL VNGFQVNHEP TNPPFLPTNS DHPSDSSTSL  60
SSGSDGDAFD ISDCSQPVLK YISDILLEED LEEGSSFTQP TPLSDHQSFE NSDDDSTHSC  120
HRINDYRAEK TDWVFDSSET SHVQSSLVES PPDTLLASDS LYGNFGGVGE ARKLLPNENF  180
GIIDLEKYQF MSQGPNTLFR NLASKTENDG YNSTNISKEK KNRQREDGDY AEEGRSNKQS  240
AAYADDSEPQ EMFDKVLLCS VNHESESCSH DIPLKNEGSG KLKQSKGSKT ARSKKQNNKR  300
EVVDFSTLLT QCAQAVASYD QRTASELLKQ IRKHSSPYGD ATERLAHYFA DGLEARLAGT  360
RTPPYSPLLS IQTPAAEILK AYQLYVTHCP YKKMLHFFSN RTIMKLAEKA TRLHIIDFGI  420
SYGFQWPCFI QRLSKRPGGP PNIRMTAIEL PQPGFRPTER VEETGRRLDK YAKRFNVPFQ  480
YKVIAQKWET IQFEDLKIDR DELIVVNCMH RLKHIPDETV MASSPRDTVL KLIKRINPDL  540
YIHGVVNGAY NSPFFLTRFR EALFHFSAQF DMFEATIPRE DEQRLMFEKA VFGKDIMNVI  600
ACEGLERVER PETYKQWQVA FSVLMEELNF GHGSNSVSSD QNLVNGLQVN HEPTNKLLLP  660
ANFDRPNDSS TSSEGDTVDS TDCNLPGLKY ISDILLEEDL EGKPCMLEDI LGLHAAEKSF  720
YDALNQKDPP LPNQPSFSVY QSFENSDGGF QSSNGSISGF QSSNGSIAAK TGSVWDFSET  780
SHVQTSPLES LSDITSVSDS FSDMQSLGNS RGVGEGNEII DLEGYQCMPP GPNTLYRNLA  840
SVPENYGYNS TNGSKGKKNR QREDGHYTEE GRGNKQSAAF ADDSDPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-156GRAS family protein