PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g737040.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 715aa    MW: 81126.4 Da    PI: 6.3394
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g737040.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS389.83.1e-1193427132374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL++cA+av+s d++ a++lL+++++++sp+gd++qRla+yf+ +L+arla+  +  y+ l + + s    +e l+a+++f+  sP+ ++s
  Pd.00g737040.m01 342 STLLTQCAQAVASYDQRTASELLKQIRQHSSPYGDATQRLAHYFADGLEARLAGARTPSYSPLISMQIS---AAEILKAYEVFVTSSPFRTVS 431
                       579***************************************************989999888888887...8******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +++aN++Il+ +e+++r+H+iDf+is+G+QWp+++q L++Rp+gpp+lRiT+++ p++g   +e++eetg+rL+k+Ae+++vpfe+nv +a++
  Pd.00g737040.m01 432 NFLANRTILKLAEKATRLHVIDFGISYGFQWPCFIQRLSKRPDGPPKLRITAIELPQPGfrPTEKVEETGRRLKKYAERFNVPFEYNV-IAQK 523
                       **********************************************************9****************************9.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +e++++e+L+++++E+++Vn++ +l +++d +v ++s+rd vLkl+k+++P+++++   +  +ns+ F++rf eal ++salfd +ea++pre
  Pd.00g737040.m01 524 WETIQFEDLKIDRNEVIVVNCMNRLRHIPDVTVMVNSPRDIVLKLIKKINPDLFIHGVVNGTYNSPFFVTRFREALFHFSALFDVFEASVPRE 616
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsv 370
                       +e r++ E+++ g++i nvvaceg er+er et+++W+ r  +aGFk++pl++++ k++k++l+ ++  + +r++ee +++++gWk+r+++++
  Pd.00g737040.m01 617 DERRRMFEKAVYGKDILNVVACEGLERIERPETYKQWQVRNVRAGFKQLPLDQEILKKVKRMLKFMGyHNDFRIDEEGHWILQGWKGRTIMAL 709
                       ****************************************************************9999999********************** PP

              GRAS 371 SaWr 374
                       S+W+
  Pd.00g737040.m01 710 SFWK 713
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    
MDSLLERYSL SLERFNFGHD SASLHCNQNL VNGFQVNQES TGQICLSTNL DHPSDSHTSL  60
SSGSDGDTTD ISDYNCPVIK YISDILLEED LEGKPCMLQD CLALQAAEKS FYDVLNQKDP  120
PSPNQPPLSV HQSFENSDDD SPHSCHSSNA SIAAKTNWVF DPSGTSKVQS SLVQSLPDAG  180
LDSDSLSEMQ RLEYFGGLRE ASKFLPSVKF ETIDLKGCQL MPPGLDQWHP ATNTLMRRPD  240
NDDYSSTNRS KGKKNHQRDD GDYPEEGRSN KQPVAFADDS EPQEMFDEVL LCLGNHEFES  300
CSNDESLITE GSGKLQPNKQ SKGSKTAGSK KQNNNRELVD LSTLLTQCAQ AVASYDQRTA  360
SELLKQIRQH SSPYGDATQR LAHYFADGLE ARLAGARTPS YSPLISMQIS AAEILKAYEV  420
FVTSSPFRTV SNFLANRTIL KLAEKATRLH VIDFGISYGF QWPCFIQRLS KRPDGPPKLR  480
ITAIELPQPG FRPTEKVEET GRRLKKYAER FNVPFEYNVI AQKWETIQFE DLKIDRNEVI  540
VVNCMNRLRH IPDVTVMVNS PRDIVLKLIK KINPDLFIHG VVNGTYNSPF FVTRFREALF  600
HFSALFDVFE ASVPREDERR RMFEKAVYGK DILNVVACEG LERIERPETY KQWQVRNVRA  660
GFKQLPLDQE ILKKVKRMLK FMGYHNDFRI DEEGHWILQG WKGRTIMALS FWKKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein