PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g737020.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 709aa    MW: 80354.1 Da    PI: 5.8842
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g737020.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS381.31.1e-1163367072374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL++cA+av+s d++ a++lL+++++++sp+gd++qR a+yf+ +L+arla+  +  y+ l + + s    +e l+a++++   sP+ k+s
  Pd.00g737020.m01 336 STLLTQCAQAVASYDQRTASELLKQIRQHSSPYGDATQRSAHYFADGLEARLAGARTPSYSPLVSMQIS---AAEILKAHEVYITSSPFKKMS 425
                       579***************************************************999999999999998...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +++aN++Il+ +e+++r+H+iDf+is+G+QWp++++ L++Rp+gpp+lRiT+++ p++g   +e++eetg+rL+k+Ae+++vpfe+nv +a++
  Pd.00g737020.m01 426 NFLANRTILKLAEKATRLHVIDFGISYGFQWPCFIHRLSERPGGPPKLRITAIELPQPGfrPTERVEETGRRLEKYAERFNVPFEYNV-IAQK 517
                       **********************************************************9****************************9.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +e++++e+Lr++++E ++Vn++ +l++++de+v ++s+rd vLkl+k+++P+++v+   +  +ns+ F++rf eal ++salfd++ea +p+e
  Pd.00g737020.m01 518 WETIQFEDLRIDRNELIVVNCMNRLKHIPDETVMVNSPRDIVLKLIKKINPDLFVHGVVNGTYNSPFFVTRFKEALFHFSALFDMFEACVPHE 610
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsv 370
                       +e r   E+++ gr+i nvvaceg er+er et+++W+ r  +aGFk+vpl+++  k +k++l+ ++  + +r++e+ +++++gWk+r   ++
  Pd.00g737020.m01 611 DERRLLFEKAVYGRDILNVVACEGLERVERPETYKQWQVRNVRAGFKQVPLDQELLKRVKRMLKFMGyHNDFRIDEDGHWMLQGWKGRITRAL 703
                       ****************************************************************9999999********************** PP

              GRAS 371 SaWr 374
                       S+W+
  Pd.00g737020.m01 704 SFWK 707
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 709 aa     Download sequence    
MDTLLERYYL SMERFNFGHG SASLDSNQNL VNGFQVNQES TSPVRLSTNL DHPSDSSTSL  60
SSGSDGDTID FSDYNHPVLK YVSDILLEED LEGKTCMLQD CLALQAAEKS FYDVLNQEDP  120
PSPNQLPLSV HQSFENSDDD SPHSCHRSNG FIAANTDWVF DPSETSNVQS SLVQSLSDAG  180
LVSDSLSEMH SLGHSGGLGE ASKFLPNVKL EGNRVMPPGL DQWPSSTNIL MTTPDNDGYN  240
STNGSKGKKN HQREDADYPE EGRSNKQPVA FADDSEPQEM FDEVLLCHGN HEFESCSPDE  300
SLITEGSGKL QRNKQKGSKT ARSKKQNNNW ELVDLSTLLT QCAQAVASYD QRTASELLKQ  360
IRQHSSPYGD ATQRSAHYFA DGLEARLAGA RTPSYSPLVS MQISAAEILK AHEVYITSSP  420
FKKMSNFLAN RTILKLAEKA TRLHVIDFGI SYGFQWPCFI HRLSERPGGP PKLRITAIEL  480
PQPGFRPTER VEETGRRLEK YAERFNVPFE YNVIAQKWET IQFEDLRIDR NELIVVNCMN  540
RLKHIPDETV MVNSPRDIVL KLIKKINPDL FVHGVVNGTY NSPFFVTRFK EALFHFSALF  600
DMFEACVPHE DERRLLFEKA VYGRDILNVV ACEGLERVER PETYKQWQVR NVRAGFKQVP  660
LDQELLKRVK RMLKFMGYHN DFRIDEDGHW MLQGWKGRIT RALSFWKKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein