PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g737010.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 739aa    MW: 83663 Da    PI: 4.9943
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g737010.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS366.92.8e-1123627361373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL+ cA+avss+d++ +++lL+++++++spdgd  qRla++f++AL+ar+a++ +++     + ++++ +++++l+a+++   ++P+ ++
  Pd.00g737010.m01 362 LRNLLILCAQAVSSNDFRTTSELLKQVRQHSSPDGDGSQRLAHFFANALEARMAGTDTGTRMFYVSLASKRISVVDTLKAYQVHLSACPFKRI 454
                       6899***************************************************777777777777888788******************** PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       s +  N++Il+ +e+++++Hi+Df+i +G+QWp L+q L++Rp+gpp+lRiTg++ p++g   ++ +eetg+rLak++e+++vpfe+n+++++
  Pd.00g737010.m01 455 SIFFKNKMILKMAEKATTLHIVDFGILYGFQWPILIQHLSKRPGGPPKLRITGIEVPQPGfrPADWIEETGRRLAKYCERFNVPFEYNAIASQ 547
                       ***********************************************************9*9****************************999 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e+++le+L+++++E+laVn++l+ ++llde+v+++ +rd+vLkl+++++P+++v++  + ++n++ F++rf eal ++sal+d+++ +++r
  Pd.00g737010.m01 548 NWESIKLEDLKTERNEVLAVNCMLRFKNLLDETVEVNCPRDSVLKLIRRMKPDIFVHTIVNGSYNAPFFVTRFREALFHFSALYDAFDINIAR 640
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++eer k Ere+ gre++nv+aceg er+er et+++W+ r ++aG++p+pl++++ k  k  +r  + + + ++++s+++++gWk+r +++ 
  Pd.00g737010.m01 641 DNEERLKFEREFYGREAMNVIACEGLERVERPETYKQWQLRCTRAGLRPLPLDQDMLKIFKDKVRAWYHKDFVIDQDSDWMLQGWKGRIVYAS 733
                       ********************************************************************888********************** PP

              GRAS 371 SaW 373
                       S+W
  Pd.00g737010.m01 734 SCW 736
                       *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 739 aa     Download sequence    
MDPTINGVPD YTNGFNIDAE PFLPNSTQFP NLINEYQFNQ LSPDLNFLDN HFSLPSPDLE  60
PSNFVPSISV SSDGESFVPS TSLSPDGVSF APPVTTVSPG GDSSSDDNDY SETVLKFINQ  120
ILMEENIEKK PCMFYDPLGL HDTEKSFYDA LGQKYPSSSP NQQPLYIDQN VESPDDQKPF  180
LSQTSLPNDH TFQFNSHPNS QLSVPLTNDL TSVGDELHVD NALQGSSVNE FLAQNIFTDS  240
ESILQFNRGL EEASKFLPKD NQLVINLESN TTKNHERGDV APEEERSSKQ SAVYIQESEL  300
SEMFDRVLLC TGGNNESPCD NVALQNEASQ ALQPSGHPQE SNGNGGKARA KKQGKKKETV  360
DLRNLLILCA QAVSSNDFRT TSELLKQVRQ HSSPDGDGSQ RLAHFFANAL EARMAGTDTG  420
TRMFYVSLAS KRISVVDTLK AYQVHLSACP FKRISIFFKN KMILKMAEKA TTLHIVDFGI  480
LYGFQWPILI QHLSKRPGGP PKLRITGIEV PQPGFRPADW IEETGRRLAK YCERFNVPFE  540
YNAIASQNWE SIKLEDLKTE RNEVLAVNCM LRFKNLLDET VEVNCPRDSV LKLIRRMKPD  600
IFVHTIVNGS YNAPFFVTRF REALFHFSAL YDAFDINIAR DNEERLKFER EFYGREAMNV  660
IACEGLERVE RPETYKQWQL RCTRAGLRPL PLDQDMLKIF KDKVRAWYHK DFVIDQDSDW  720
MLQGWKGRIV YASSCWVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein