PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g735270.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 396aa    MW: 45606.9 Da    PI: 10.4019
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g735270.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.62e-17138218689
                       ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                       +++ +  +g l lp kfa++h ++k++ + ++l+ ++gr+W v+++y+ +     +++GW  F+++n+Lk+gD++vF l++ +e
  Pd.00g735270.m01 138 IQPVYIHRGYLHLPSKFARRH-LVKKRARNIILKILDGRTWLVEFKYETSI--ARFQRGWLAFARDNNLKVGDVCVFVLIDCNE 218
                       5566677899***********.44556779***************555554..669**********************986333 PP
2B350.15e-163163951698
                       EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       l +p +fa+++ +k  +++t+tl+  + rsW v+li   k ++  l +GW+eFv +n L  gD+++F+l++r++  l+v++fr
  Pd.00g735270.m01 316 LHVPVTFARSFVKK--RKQTVTLQV-RERSWPVNLIGHTKESGAKLCGGWREFVTENCLMKGDVCIFELIERNDIVLKVHIFR 395
                       789*****999755..444677655.78*******9877777788999**********************999999****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MASLHDSPAS IPHFLRIILD KTSKKTRIKI PMKFLMRHGE NLSSPVHLKL PSGVEMEIEL  60
RRSNDGWVWF DKGWPEFSKL CSLDYGENDM PTKKDFGGSS SSRIFLGRMH PLTKSEKALA  120
LQRANAFESE YPYFLVAIQP VYIHRGYLHL PSKFARRHLV KKRARNIILK ILDGRTWLVE  180
FKYETSIARF QRGWLAFARD NNLKVGDVCV FVLIDCNERL FEVFFYRTNN AEDCPLSPGH  240
GGVAIDRVEK RRNPMIKVET DCTTNYENGK YKRLKTSGQV TQRPLNSSSR SLEAANRFTP  300
KNPSFRATLG STPLILHVPV TFARSFVKKR KQTVTLQVRE RSWPVNLIGH TKESGAKLCG  360
GWREFVTENC LMKGDVCIFE LIERNDIVLK VHIFRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-20B3 family protein