PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g733210.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 549aa    MW: 62922.3 Da    PI: 9.8231
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g733210.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3352.6e-112343121799
                       E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       ++pkkf+ ++g +  +++ l l + s+  W+v l  r+ +g++++ k W +F +   L+    +vF+++g+s+f   v vf++
  Pd.00g733210.m01 234 RIPKKFVMKYGDDLSNPVSLELPSGSSSAWKVDL--RRLDGEVWFDKSWADFSEFYSLDRDHWLVFRYKGNSKF--QVCVFDR 312
                       7*********88877888888888888*******..**********************************9999..9999987 PP
2B349.86.1e-16439516687
                       ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       +++++ +  +l+lp +f + + +k  +s +++l+ ++ r+W v+l+y  ++gr  + +GW eFv++n+Lk++D++vF+ +++
  Pd.00g733210.m01 439 MKPSYITGYILWLPSEFHKLYPIK--NSGEVILRVLDRRTWLVNLKY--GGGRAQFLSGWMEFVHDNNLKVNDVCVFESIDN 516
                       4555666667********999877..4559***************55..555544557********************6654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    
MKFVMKYGEH LSSPVHLKLP NGAEWDIELR RGNNGGVWFD KGWPEFSKFC SLDYANWLVF  60
GYEGNSNFHV LIFDRTSTEV EYAMTKPEME ETDYEEEDDN SVEILDGFPP CPRKAREKSP  120
LPCPQPHKKM RTCGKAEGNI NFRPTKTQTS LRNKASDCSR SEMKSRYKGL KTDGQITQRP  180
LNSSSRALGA ANRFIPKNPS FTATVGSTYQ LLHVPARFAR SFIKGRKQTV TLQRIPKKFV  240
MKYGDDLSNP VSLELPSGSS SAWKVDLRRL DGEVWFDKSW ADFSEFYSLD RDHWLVFRYK  300
GNSKFQVCVF DRTCTEIDYP LRKQKMEETD DTDDYFHEDS SDDSVEEQPA DSTYPRKTRK  360
KSSLPCLRPQ KKNRTSSRGK DDYPAKSGSG STSSTRRFKK RTPGLLGSIL PLPKSGKATA  420
LQRANAYKSQ HLFSVIVAMK PSYITGYILW LPSEFHKLYP IKNSGEVILR VLDRRTWLVN  480
LKYGGGRAQF LSGWMEFVHD NNLKVNDVCV FESIDNKKIV QLSQEEQWRN LQMPCPQPPK  540
KNKASSSGK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1396402RRFKKRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-32B3 family protein