PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g733200.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 732aa MW: 82787.9 Da PI: 8.3955

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g733200.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	41.6	2.2e-13	25	113	5	99
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++p+ +++ l++p+kf+ ++g + s + l+ +sg +W+++l r+ g+ ++ kGW eF + L+ ++vF+++g+s+f +v +f Pd.00g733200.m01 25 MIPKGASRCIKLRIPNKFLMKCGDD--LSNPVFLNVPSGSKWKMEL--RRWHGEAWFDKGWPEFFEFYSLDNCHSLVFRYEGNSKF--NVCIF 111 666677777789********988..6667***********..88888899************************9999..99999 PP -S CS B3 98 rk 99 ++ Pd.00g733200.m01 112 DQ 113 87 PP
2	B3	50.7	3.2e-16	240	313	14	89
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 ++lp kf++eh ++ + +l+ + r W vkl +++++ r+ +++GW+ F ++n+L+ gD++vF+l+++ + Pd.00g733200.m01 240 YFMSLPAKFVKEHFNQVHD--NAILRVLGERAWPVKLGHWGRG-RIRFQSGWRTFLRDNHLEIGDVCVFELTSNiKP 313 569********655444..69999*******888885.899*********************9876443 PP

Sequence ? help Back to Top
Protein Sequence Length: 732 aa Download sequence
MTSLRGEIDN PTKRFSSTTP YSLVMIPKGA SRCIKLRIPN KFLMKCGDDL SNPVFLNVPS 60 GSKWKMELRR WHGEAWFDKG WPEFFEFYSL DNCHSLVFRY EGNSKFNVCI FDQSFKQIDY 120 ALKMPKMKET NSDDSGDVTE ILDESLPRPR KSREKSPLQC LRPHKKARTS SRGKVDFPAK 180 RHGGGKSITA RFSKRTEPIL GRLHPSTTSG KAIALQRAKA FKSDDPFFMV SMGRTNIDGY 240 FMSLPAKFVK EHFNQVHDNA ILRVLGERAW PVKLGHWGRG RIRFQSGWRT FLRDNHLEIG 300 DVCVFELTSN IKPLFDVVFF RATKAPNCTL SPDVDGEQTV PKMEETYEDD GFIETVDDYP 360 SCPKTRKKSP IEPQPHKKNR TCSISKAESK IKDVCGASRT RNFLVRGTEV PRRIDPVAAT 420 GKDIALQRAK AFKSEYPFCW VVMHHSYIHR SYLRLPAKIS KEHINWTHDN IVLHVPNGRT 480 WPVKLGQDAR GRVIFLSVGD VCVFELINNV KPLFDVVLFS ATKAANCILS PADDDSGCDS 540 GDDSTDDSGD ESDDNSIEIL DDFPPVPRKT REKPPHISLE RGVERANSFA SKSPFFKIAM 600 HATYIHEHHM NLSSSFVKEH LNQTSTYAIL RVSDGRTCAT KAANCILSPA DDDSGCDSGD 660 DSTDDSGDES DDNSIEILDD FPPVPRKTRE KPPHISLERG VERANSFASK SPFFKIAMHA 720 TYIHEHHMVS FL

Sequence ? help Back to Top

Protein Sequence Length: 732 aa Download sequence

MTSLRGEIDN PTKRFSSTTP YSLVMIPKGA SRCIKLRIPN KFLMKCGDDL SNPVFLNVPS  60
GSKWKMELRR WHGEAWFDKG WPEFFEFYSL DNCHSLVFRY EGNSKFNVCI FDQSFKQIDY  120
ALKMPKMKET NSDDSGDVTE ILDESLPRPR KSREKSPLQC LRPHKKARTS SRGKVDFPAK  180
RHGGGKSITA RFSKRTEPIL GRLHPSTTSG KAIALQRAKA FKSDDPFFMV SMGRTNIDGY  240
FMSLPAKFVK EHFNQVHDNA ILRVLGERAW PVKLGHWGRG RIRFQSGWRT FLRDNHLEIG  300
DVCVFELTSN IKPLFDVVFF RATKAPNCTL SPDVDGEQTV PKMEETYEDD GFIETVDDYP  360
SCPKTRKKSP IEPQPHKKNR TCSISKAESK IKDVCGASRT RNFLVRGTEV PRRIDPVAAT  420
GKDIALQRAK AFKSEYPFCW VVMHHSYIHR SYLRLPAKIS KEHINWTHDN IVLHVPNGRT  480
WPVKLGQDAR GRVIFLSVGD VCVFELINNV KPLFDVVLFS ATKAANCILS PADDDSGCDS  540
GDDSTDDSGD ESDDNSIEIL DDFPPVPRKT REKPPHISLE RGVERANSFA SKSPFFKIAM  600
HATYIHEHHM NLSSSFVKEH LNQTSTYAIL RVSDGRTCAT KAANCILSPA DDDSGCDSGD  660
DSTDDSGDES DDNSIEILDD FPPVPRKTRE KPPHISLERG VERANSFASK SPFFKIAMHA  720
TYIHEHHMVS FL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	155	PRKSREK
2	567	573	PRKSREK
3	685	691	PRKSREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	7e-35	B3 family protein