PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g720690.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 750aa    MW: 84212.7 Da    PI: 6.8462
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g720690.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS379.15.3e-1163777481374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cA+av+++d++ a++lL+++++++sp gd +qRla++++ +L+arla+++s++ykal +++ts    ++ l+a++l+  +sP+ k+
  Pd.00g720690.m01 377 LRTLLISCAQAVAADDHRSANELLKKVRQHSSPFGDGTQRLAHCLADGLEARLAGTGSQIYKALVSKRTS---AADFLKAHHLYLAASPFKKI 466
                       6789*************************************************************99999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       s+++ N++I++ +++++rvH+iDf+i +G+QWp+L+q ++ R++gpp+lRiTg++ p++g   +e++eetg+rLa +Ae+++vpfe+n+ +ak
  Pd.00g720690.m01 467 SNFVSNKTIMNLAQNATRVHVIDFGILYGFQWPTLIQRISWRDGGPPRLRITGIEFPQPGfrPAERVEETGHRLAAYAEKFNVPFEYNA-IAK 558
                       ***********************************************************9*****************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++++++leeL+++++E+l+Vn+ ++ ++lldesv+++s+r++vL+l+++++P+++++   +   n++ F++rf eal ++s+lfd+le+ +pr
  Pd.00g720690.m01 559 NWDTIKLEELKIDRDEVLVVNFLYRGKNLLDESVAVDSPRNRVLDLIRRINPDLFIHGIVNGAFNAPFFVTRFREALFHFSSLFDMLETVVPR 651
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       e++er+ +E e++gre+ nv+aceg er+er et+++W+ r  +aGF ++pl+   +k a   +r  + + + ++e+s +l++gWk+r+++++
  Pd.00g720690.m01 652 EDRERMLIETEIFGREALNVIACEGWERVERPETYKQWQVRNLRAGFVQLPLDRGLVKRAGEKVRSGYHKDFVIDEDSRWLLQGWKGRTVYAL 744
                       ******************************************************************99888********************** PP

              GRAS 371 SaWr 374
                       S W+
  Pd.00g720690.m01 745 STWK 748
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 750 aa     Download sequence    
MTMDRRLRAF SDSFNGVQLG NRVLPVLSHP NIVARSQLDS NTFLDNNYRE FNNPQPVLTP  60
NNVSSYASVS PEDDSQEDCD FSDVVLKYIN QMLMEEDMED KTCMLQESLE LQAAEKSFYE  120
VLGKKYPPSP ELHQDYAIQY GESPGDSFSG TGSNYITSTC NSGGYFSDNT LIQSPDGYLS  180
QLKGLPAYSI SQSRYGSSTR VSSLDGQVDS PNSLHMPDLN TESQSVWQFK KGVEEASRFL  240
PGETKLVVNL KANGLSAQAP KVGTNGEVVK VEKKDEGEYS PSGSRGRKNM YREDDDVEES  300
RSSKQAAVST ESILRSELFD TVLLCSTGEG RERLESLREA LQNGMSKSVP QNGQSKGSNG  360
GKGRGKKQTG KKEVVDLRTL LISCAQAVAA DDHRSANELL KKVRQHSSPF GDGTQRLAHC  420
LADGLEARLA GTGSQIYKAL VSKRTSAADF LKAHHLYLAA SPFKKISNFV SNKTIMNLAQ  480
NATRVHVIDF GILYGFQWPT LIQRISWRDG GPPRLRITGI EFPQPGFRPA ERVEETGHRL  540
AAYAEKFNVP FEYNAIAKNW DTIKLEELKI DRDEVLVVNF LYRGKNLLDE SVAVDSPRNR  600
VLDLIRRINP DLFIHGIVNG AFNAPFFVTR FREALFHFSS LFDMLETVVP REDRERMLIE  660
TEIFGREALN VIACEGWERV ERPETYKQWQ VRNLRAGFVQ LPLDRGLVKR AGEKVRSGYH  720
KDFVIDEDSR WLLQGWKGRT VYALSTWKPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein