PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g717470.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 367aa MW: 42544.9 Da PI: 4.4577 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 58.9 | 1.7e-18 | 10 | 149 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWka 85 GfrF+Ptd+e++ +L k v +k+ + ++vi+++++ +k eP+++ + + + +++++yf s+ ++ +g r +r+t +g+W++ Pd.00g717470.m01 10 LGFRFRPTDQEIIGSFLYKMVVEKRpltsmPPYNKVIHRCNLfgNKREPSEIWRDYGGdqlKDQDLYFVSELQR---NGLRIQRKTGRGTWSE 99 6*******************9999888886666678****9833577*****7533222236668888888766...799************* PP NAM 86 tgkdkevlsk........kgel..vglkktLvfykgrapkgektdWvmheyrl 128 t + ++v+++ + l +g k+ + + +g++++ ++ W+++ey+l Pd.00g717470.m01 100 TETYQNVKDEvdeingksN--LdvIGRKRKFRYENGNTSE-DHAGWLLDEYSL 149 ********98777755443..166*********9988888.89********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence |
MANSGVTQLL GFRFRPTDQE IIGSFLYKMV VEKRPLTSMP PYNKVIHRCN LFGNKREPSE 60 IWRDYGGDQL KDQDLYFVSE LQRNGLRIQR KTGRGTWSET ETYQNVKDEV DEINGKSNLD 120 VIGRKRKFRY ENGNTSEDHA GWLLDEYSLF KQACKNGTSS NCYDFDVVIC RLRRKGNMDK 180 SGKKRKCSSQ DQSNKKMKRD QSTKEMKTEN SVGPQIMNDE RNQSMTNDST TYDPEYLIDT 240 NYKSFDIDEL FAELEREPPL LHSQQLPEIV ESQEEPCVNQ FDGPVDAATS NLSNFEYNFD 300 ELAGLIWNAD DHEDPNLFFE VDELLAEDAE PLSTSELDDV YNMVSQPLDQ NSYRSNSFMD 360 QNYSSYI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 173 | 198 | RRKGNMDKSGKKRKCSSQDQSNKKMK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10480.2 | 8e-12 | NAC family protein |