PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g711540.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Trihelix | ||||||||
Protein Properties | Length: 528aa MW: 57051.9 Da PI: 6.872 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 58.9 | 1.3e-18 | 149 | 235 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ + +L++a++++ ++l+rg+l++ +Weev++ + r ++s qCk+k +nl+kryk ++++++++ s s++p+f+++e Pd.00g711540.m01 149 EWSDSAISCLLDAYTDKFTQLNRGNLRGRDWEEVAAIVseRCDRQRKSVDQCKNKVDNLKKRYKLERQRMNNG-GVSASHWPWFKKME 235 5*************************************544456677**********************9998.566679*******8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 528 aa Download sequence |
MASCDDDFSI LGDESNTTHH SHLPHAPASH QLHQPYAPPH RFATRTTPVH APPAQPILSD 60 KVNAGEDQAE AGDDYDDASA AAFCSNPFES GTDQNDVVAG ASEKRKDHSD ELSDGGGGGG 120 GSGSAPYSYK RSKPSSAAAI GEYRKDREEW SDSAISCLLD AYTDKFTQLN RGNLRGRDWE 180 EVAAIVSERC DRQRKSVDQC KNKVDNLKKR YKLERQRMNN GGVSASHWPW FKKMENIVGN 240 SLPGKAVSDE DKVVSSPGTT PRQSKRNAMA IISPVSQMNK VKSAPSIKWR RVVFKISGAA 300 LAGAAPNNVD SKLAMLIARE VALACHNGVE VAIVVGGRNF FCGDAWVTAT GLDRSTAYQI 360 GMMATVMNSV LLQSALEKMG VQTRVQTAFS MQEVAEPYSR QRAIRHLEKG RVVIFAGIGA 420 GTGNPLFSTD TAAALRALEI HAEAVLKGTN VDGVYDCNSQ DNNFTFEHIS FRDVVTRGAT 480 SMDSMALTFC EENRIPVVVF NLLEPGNISK ALCGEQVGTL IDQAGRIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10030.1 | 0.0 | Trihelix family protein |