PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g709750.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 468aa MW: 52234.8 Da PI: 4.2519 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 55.7 | 1.7e-17 | 14 | 64 | 1 | 50 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..k 50 lp GfrF+Ptdeel+++yL+ k++g++ ++ +vi+e+d++k+ePwdLp + Pd.00g709750.m01 14 LPLGFRFRPTDEELIDYYLRSKINGNHKQV-TVIREIDVCKWEPWDLPDlsE 64 699************************999.99**************94232 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 468 aa Download sequence |
MLVVDMAVLS TNTLPLGFRF RPTDEELIDY YLRSKINGNH KQVTVIREID VCKWEPWDLP 60 DLSELDGTNP GQNPFVLCRL FKKQDETIED SNFAEVEPTV SSSTAAISSP QDAQSDHALG 120 PASPSFERLD EKPTKVECTI ADCSNGMEPD TLQPFECPCN SYNGYDAEDQ LNVPLEELDI 180 FYDPPQQPLF SPLHSQMQTE LYYCGSNNFN NGHQGVRFQH GTNDQDADIS EFLSSIFNSS 240 GEYSDVDAKV AVPCETEFQN SVQSEGNNDR KGQVQNESTR IDCDQSSMFR VTSNHSNVFL 300 TGDAGTGIRL RTRETQNPTS TENFARQGDA PRRLRLQRKV LYCSNLSKDW NCRPEDQETK 360 PMAVEEIRDT EEKAVDAAVS DAVDAATDPP RKETMSTRPN FTPEGSILTG ERVPNVILQA 420 SPAGHSMWSF AFLFRVVVVV AFLFIMLLAY GDFISFDAAG SPFTARMA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24590.2 | 4e-24 | NAC family protein |