PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g705320.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 250aa MW: 29084.9 Da PI: 8.4682 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 84.1 | 2.2e-26 | 85 | 173 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA++vGF +r+ + ++s+r+g+i r++ C+keg+ + + k r++ra+tr gCka+++vk +k++kw++tk+ ++HnH+l+ Pd.00g705320.m01 85 FYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKPRASTREGCKAMIHVKYDKSSKWVITKFIKDHNHPLV 173 9**************************************99999998****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MHDNTFAIKD KTKHSHFEAF TSQRNFHSRP ENEDLLSLLE SMDSDEGARA VESSSSQALV 60 LYEADSILEP YEGMEFESED AAKIFYDEYA RRVGFVMRVM SCRRSERDGR ILARRLGCNK 120 EGHCVSIRGK FGPVRKPRAS TREGCKAMIH VKYDKSSKWV ITKFIKDHNH PLVVSPREAR 180 QTMDEKDKKI QELTAELRNK KRLCTTYQEQ LTAFTKIVEE YSDQLSKKVQ NVVSNLKEFE 240 SIDRELLQHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 1e-111 | FAR1 family protein |