PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g705280.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 318aa    MW: 36941.6 Da    PI: 6.6265
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g705280.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1842.5e-26138228190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY +Y+++ GF+vr++++++s+ n++++ ++fvCskeg+r+++  +++++    + ++tr gC+a++++ +++  kw+vtk+++eHnH+l+
  Pd.00g705280.m01 138 EFYVAYGRRSGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDR-VlpPPPVTREGCQAMIRLALRDGLKWVVTKFVKEHNHKLM 228
                       6******************************************99883332.245899********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MTCVHCNYNW WRYVRLTFFV QKRWGPATSC KINHLGSWSG HGEIDLRLPL SSNLGVGVWN  60
IMDHQSVHGF DSDESDLDMH AETYENNEGM EDVLSENLDL CLDEKEGIAE PSADLPMNIE  120
ALEPNIGMEF NSRDEAREFY VAYGRRSGFT VRIHHNRRSR VNNQVIGQDF VCSKEGFRAK  180
KYVHRKDRVL PPPPVTREGC QAMIRLALRD GLKWVVTKFV KEHNHKLMSP SKVPWRGSGK  240
HLASEDEKDK RIRELSLELY NERQKCKRRC AAYEEQLNLI LKDLEKHTEH MSKKVADIVQ  300
SIREIEEEQS EDSDSGWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-38FAR1 family protein