PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g695650.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 615aa    MW: 67671.3 Da    PI: 5.1493
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g695650.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS454.75.9e-1392476061374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       lv+ L++cAeav++++l+la+al++++  la +++ +m+++a+yf+eALa+r++r    +y    p++    ++s + + +  f+e++P+lkf
  Pd.00g695650.m01 247 LVHGLMACAEAVQQNNLNLAKALVTQIGYLAISQAGAMRKVATYFAEALAQRIFR----VY----PQSPI--DHSFSDMLQMHFYETCPYLKF 329
                       6899***************************************************....44....33333..23444444556********** PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                       +h+taNqaIlea++g++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+s++++ l+e+g++La++Ae+++v+fe++ +va++l
  Pd.00g695650.m01 330 AHFTANQAILEALQGKTRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPASDNSDHLQEVGWKLAQLAETIHVEFEYRGFVANSL 422
                       ********************************************************************************************* PP

              GRAS 187 edleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +dl+ ++L+++p   E++aVn+v++lh+ll +++++e+    vL++vk+++P++v+vveqea+hn++ F++rf e+l+yys+lfdsle ++  
  Pd.00g695650.m01 423 ADLDASMLELRPseVESVAVNSVFELHKLLGRPGAIEK----VLSVVKQMKPEIVTVVEQEANHNGPVFMDRFNESLHYYSTLFDSLEGSV-- 509
                       ************88899*******************99....************************************************7.. PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvs 369
                        +++++ +++ +lg++i+nvvaceg +r+erhetl++Wr rl++aGF pv+l+++a kqa++ll+ ++ +dgyrvee++g+l+lgW++rpL++
  Pd.00g695650.m01 510 -NSQDKAMSELYLGKQICNVVACEGVDRVERHETLAQWRTRLDSAGFVPVHLGSNAFKQASMLLALFAgGDGYRVEENNGCLMLGWHTRPLIA 601
                       .88889999999********************************************************************************* PP

              GRAS 370 vSaWr 374
                       +SaW+
  Pd.00g695650.m01 602 TSAWK 606
                       ****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 615 aa     Download sequence    
MASTSAGDCG KASNKMWEED AQRIDGGMDE LLAVLGYKVR SSDMAEVAQK LEQLEEFMGS  60
VQEDGLSQLA SDTVHYNPSD LSTWLESMIS EINPPPDFNP LMAAAAVPLP NQQQQVQLGD  120
DSFLAPAESS TITSIDFRDQ QMSKSLSPPP PQTQNHHPHH QVVFDDCNSS SNYYDLKATM  180
FTQTHHDSSS REAKRLKPSS GSSASDLVFN RRTASSLPQP QPLSIPTTES STRPALLVDS  240
QENGVRLVHG LMACAEAVQQ NNLNLAKALV TQIGYLAISQ AGAMRKVATY FAEALAQRIF  300
RVYPQSPIDH SFSDMLQMHF YETCPYLKFA HFTANQAILE ALQGKTRVHV IDFSMNQGMQ  360
WPALMQALAL RPGGPPAFRL TGIGPPASDN SDHLQEVGWK LAQLAETIHV EFEYRGFVAN  420
SLADLDASML ELRPSEVESV AVNSVFELHK LLGRPGAIEK VLSVVKQMKP EIVTVVEQEA  480
NHNGPVFMDR FNESLHYYST LFDSLEGSVN SQDKAMSELY LGKQICNVVA CEGVDRVERH  540
ETLAQWRTRL DSAGFVPVHL GSNAFKQASM LLALFAGGDG YRVEENNGCL MLGWHTRPLI  600
ATSAWKPGCD SVMAH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein