PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g694310.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 547aa    MW: 59697.2 Da    PI: 4.761
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g694310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS366.14.9e-1121775472374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        ++Ll+cA+ ++++d  +a + L rl+e +s +gdp++R+ +yfteAL++r++    +  k+l++++t ++  ++ + ++k++++++P+ kf+
  Pd.00g694310.m01 177 LKALLDCAR-LAESDPDRAVKSLIRLRESVSDRGDPTERVGFYFTEALQSRVSY--LQSEKSLAATTTYDTACEDFTLSYKALNDACPYSKFA 266
                       689******.566699999**********************************9..6666778888888888********************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       hltaNqaIlea+e+++++Hi+Df+i qG+QW+aLlqaLa+R+ g+p ++Ri g+ +p+ g   + +l +tg+rL++fA+ l+++fef++ + +
  Pd.00g694310.m01 267 HLTANQAILEATERATKIHIVDFGIVQGVQWAALLQALATRSTGKPsRIRISGIPAPSLGtsPAASLFATGNRLRDFAKLLELNFEFEP-ILT 358
                       ******************************************666659*********99999999************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                        +++l+ + +rv+p+EalaVnl+lql++llde+ +  +   + Lkl ksl Pk+v++ e ea++++  F  rf +al+yy+alf+sle ++pr
  Pd.00g694310.m01 359 PVHELDESCFRVEPDEALAVNLMLQLYNLLDETPTAVQ---SALKLAKSLTPKIVTLGEYEANLSRVGFTSRFKNALKYYTALFESLEPNMPR 448
                       ******************************99999998...9*************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv.lgWkdrpLv 368
                       +s er kvE+ llgr+i  vv  e+   +rer e +e+W+  +e++GF+pv+ls++a++qak ll ++++  y++ e+   ++ l W++ pL+
  Pd.00g694310.m01 449 DSPERLKVEKLLLGRRIGGVVGPEQPGtKRERFEDKEQWKYLMESSGFEPVALSHYAVSQAKILLWNYNNSLYSLIESPPGFLsLAWNEVPLF 541
                       ***********************998769****************************************999999888666666********* PP

              GRAS 369 svSaWr 374
                       +vS+Wr
  Pd.00g694310.m01 542 TVSSWR 547
                       *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    
MAYMCADSGN LMAIAQQLSG SSDAGGEPGF PFPNLDHHPT GFRFSDLGGG GAAEFDSDEW  60
MDSIIGGGDS TDSSNLPSAC DTWHGSNADF GLYGADPFQP PCPSRLSNPC SPPSDLNRVI  120
FSETQNQLTA WTAPPPPPPA PHVVVKQAKS ADPPPQPNDA VGVSSRSPEI ESAPPLLKAL  180
LDCARLAESD PDRAVKSLIR LRESVSDRGD PTERVGFYFT EALQSRVSYL QSEKSLAATT  240
TYDTACEDFT LSYKALNDAC PYSKFAHLTA NQAILEATER ATKIHIVDFG IVQGVQWAAL  300
LQALATRSTG KPSRIRISGI PAPSLGTSPA ASLFATGNRL RDFAKLLELN FEFEPILTPV  360
HELDESCFRV EPDEALAVNL MLQLYNLLDE TPTAVQSALK LAKSLTPKIV TLGEYEANLS  420
RVGFTSRFKN ALKYYTALFE SLEPNMPRDS PERLKVEKLL LGRRIGGVVG PEQPGTKRER  480
FEDKEQWKYL MESSGFEPVA LSHYAVSQAK ILLWNYNNSL YSLIESPPGF LSLAWNEVPL  540
FTVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein