PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g694140.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ZF-HD
Protein Properties Length: 327aa    MW: 35908.5 Da    PI: 9.2208
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g694140.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.23.6e-32116172259
       ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                       +kvrYkeCl+NhAas Ggh++DGCgEfmps gee  ++alkCaAC+CHRnFHR+e e 
  Pd.00g694140.m01 116 QKVRYKECLRNHAASSGGHVLDGCGEFMPS-GEEDIPEALKCAACECHRNFHRKEIEG 172
                       689**************************9.88889******************9875 PP
2Homeobox14.27.6e-05264324157
                       TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
          Homeobox   1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                       +r Rt+f++eq e + e+ e    k +  +++e ++L +++g++ ++ kvW +N ++ +kk
  Pd.00g694140.m01 264 KRFRTKFSQEQKEKMMEVAEklgwKIQRHDEQEVQKLCSEVGIKRQVFKVWMHNNKQAMKK 324
                       789*************99996666688899***************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MEVRGQDKVI GMPTTLGYNP PNRDSSSSKL SSSPALPSTA NNTIFINPLQ TLDPHPPPPH  60
HQPHQLNLSP HKSSRRDSEQ NPDPISSPIV VTPSATSIPG GSNFKAPPVQ PPPAPQKVRY  120
KECLRNHAAS SGGHVLDGCG EFMPSGEEDI PEALKCAACE CHRNFHRKEI EGDHLPNNYY  180
VVNHQKHTIS RRDSETRVLQ LPPPPQPPVH HSAAGGPVPP MMMAFGGGGG GGGGADESSS  240
EDLNMNNLFR ATYAAGQQAA GSKKRFRTKF SQEQKEKMME VAEKLGWKIQ RHDEQEVQKL  300
CSEVGIKRQV FKVWMHNNKQ AMKKKQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.16e-56ZF-HD family protein