PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g689670.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 191aa MW: 21377.3 Da PI: 9.9339

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g689670.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.2e-17	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l+d++k +G g+W++ ++ g++R++k+c++rw +yl Pd.00g689670.m01 13 KGAWSKQEDQKLIDYIKAHGEGCWRSLPKAAGLHRCGKSCRLRWINYL 60 79********************************************97 PP
2	Myb_DNA-binding	52.8	9.3e-17	66	110	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++ Pd.00g689670.m01 66 RGNFEQDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSH 110 899*****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MRKPCCEKEG TNKGAWSKQE DQKLIDYIKA HGEGCWRSLP KAAGLHRCGK SCRLRWINYL 60 RPDIKRGNFE QDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH IRKKLIKMGI 120 DPNNHRLNQI IPRPNPQNDC VSAAATSSGS MSNISACTKA PIKSSREIDQ RASQATSVLE 180 DETSGIGKGG N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	2e-77	MYB family protein