PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g687030.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family BBR-BPC
Protein Properties Length: 383aa    MW: 43288.2 Da    PI: 10.1316
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g687030.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind396.53.7e-121473831301
         GAGA_bind   1 mdddgsre..rnkg.yyepa..aslkenl..glqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalll 86 
                       mdd+g+re  r k+ +y+ a  + l +++   +q+m+++aerda+++ernla+sekkaa++erdmaflqrd+a+aern a++erdn++++l++
  Pd.00g687030.m01  47 MDDSGHREngRIKAeQYKAAqgQWLMQHQpsMKQIMAIMAERDAALQERNLAFSEKKAALQERDMAFLQRDAAIAERNSAIMERDNAIATLQY 139
                       9*****999999999999444433443431135************************************************************ PP

         GAGA_bind  87 vensla....salpvgvqvlsgtksidslqq.lse.pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksek 173
                       +ensl+    s++p+g+q+++g+k++++ qq +++ p++++ ++++r+++++++ p+   a+  ++      ++++k+p+e+k+++++kk++k
  Pd.00g687030.m01 140 RENSLNngnvSSCPPGCQISRGVKHMHHPQQhVHHpPHMNEASYGTRDMHTSDSVPMPPDASLPTK------SRQPKRPREPKTTAPNKKTSK 226
                       ****9999999********************555589*************9999996654444333......345668888888888888888 PP

         GAGA_bind 174 skkkvkkesader.............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtt 237
                       s +kvk+es+d +                             sk+++k++dl+ln+v++Dest+P+PvCsCtG+lrqCYkWGnGGWqS+CCtt
  Pd.00g687030.m01 227 SPRKVKRESEDLNkmtfdklhewkgsqdmggggddvnkhlvvSKSDWKCQDLGLNQVAYDESTMPAPVCSCTGILRQCYKWGNGGWQSSCCTT 319
                       8888888888844588899999*********************************************************************** PP

         GAGA_bind 238 tiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                       t+S+yPLP+++++r+aR++grKmS++af+klL++LaaeG+dlsnpvDLkd WAkHGtn+++ti+
  Pd.00g687030.m01 320 TMSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDNWAKHGTNRYITIK 383
                       ***************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MREHKKLKIL LLSDYSPCTG YHRLPRKPGF LQTHSLSRRL WVCRTNMDDS GHRENGRIKA  60
EQYKAAQGQW LMQHQPSMKQ IMAIMAERDA ALQERNLAFS EKKAALQERD MAFLQRDAAI  120
AERNSAIMER DNAIATLQYR ENSLNNGNVS SCPPGCQISR GVKHMHHPQQ HVHHPPHMNE  180
ASYGTRDMHT SDSVPMPPDA SLPTKSRQPK RPREPKTTAP NKKTSKSPRK VKRESEDLNK  240
MTFDKLHEWK GSQDMGGGGD DVNKHLVVSK SDWKCQDLGL NQVAYDESTM PAPVCSCTGI  300
LRQCYKWGNG GWQSSCCTTT MSMYPLPAVP NKRHARVGGR KMSGSAFNKL LSRLAAEGHD  360
LSNPVDLKDN WAKHGTNRYI TIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-157BBR-BPC family protein