PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g685580.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 242aa MW: 27280.4 Da PI: 9.7787 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 58.1 | 3e-18 | 9 | 148 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk........leleevikevdiykveP.w.dLpkkvkaeekewyfFskrdkkyatgkrknratksgy. 82 lp+G+rF+P+ l+ +yL ++v++ l+ +++ e+diy e w +L +++e+++yfF++ +kk+ +g+r +r+ g Pd.00g685580.m01 9 LPVGCRFEPSKTKLLAHYLYNRVAHYLynkvnglpLSS-NTVIECDIYGKEEtWrKLF--DETGETSLYFFTELKKKTMRGSRIERTSLGGCv 98 799*************9999998887655555532333.358999**98754141453..34578899******************8776655 PP NAM 83 .Wkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 Wk++ +dk+++ + +++l+g k+t+ + +++++ k + vmhe+rl Pd.00g685580.m01 99 tWKNQ-SDKAIYGNdgppNKTLIGYKRTFSYVPKKTSTKAKGEMVMHEFRL 148 5*987.6799999888888889**********99999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
METTRGLGLP VGCRFEPSKT KLLAHYLYNR VAHYLYNKVN GLPLSSNTVI ECDIYGKEET 60 WRKLFDETGE TSLYFFTELK KKTMRGSRIE RTSLGGCVTW KNQSDKAIYG NDGPPNKTLI 120 GYKRTFSYVP KKTSTKAKGE MVMHEFRLVG CLLNNNNNQS YEATLTCPLY DYFFLPSSGV 180 LVDINVSYLN SAYSGEEVEV KAKALRVGKA VGVASVELRK KKTCKIIAQG YHTKYLALTS 240 KL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12977.1 | 5e-14 | NAC family protein |