PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g684410.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 554aa MW: 61680.9 Da PI: 4.3369 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 81 | 2.5e-25 | 141 | 259 | 13 | 128 |
NAM 13 elvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 +l ++Lk+ ++gk + i+e+d+yk+ePwdL + + + w+ Fs+ d kya++ r nrat++g+Wk tgk+++v+s+ +++ Pd.00g684410.m01 141 QLFGRFLKRMMQGKASQS---IPEIDVYKYEPWDLAElmfpDSPYQPRAWFSFSRPDYKYANSPRCNRATEKGFWKITGKTRQVKSRqlPKSV 230 678899*******99666...**************8444553333778**************************************8665666 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 + k+tL+f++gr +k+++t Wv +ey l Pd.00g684410.m01 231 TCKKRTLTFHEGRVSKSRNTGWVRQEYYL 259 77889**********************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 554 aa Download sequence |
MISVDEDHVW EEYVKSHDDA RGFRFKVIEH WDDIVDLCGK NSATGWHAET GADAIEVMTP 60 PTNEVEHVEL DGDTQAEGGM SSSMSTTEES VLDLLPKFRF HPSEEEMVNL LKNKVEGQDS 120 QAMPDEIVDK PWDLPDNESV QLFGRFLKRM MQGKASQSIP EIDVYKYEPW DLAELMFPDS 180 PYQPRAWFSF SRPDYKYANS PRCNRATEKG FWKITGKTRQ VKSRQLPKSV TCKKRTLTFH 240 EGRVSKSRNT GWVRQEYYLT PTGPGSNPNQ LSGFVLCRMK NKSTDNESDN KKQQDVSICV 300 ESADPGIAGC MASNSELDQA AGIHLIPDAE EHLTYKELEH VLLGSGNQND GEPGGFVSSD 360 FDDMIQELCA KGGEYLDLPS PPPEPPRQHQ LPQLGNVPVT GDYFGSNSND QAAAINHMIP 420 DPEELLAYKE LERVLGSCNP DDDEPDGCVS SNMLQKLCAQ LGEELDSPIP PPGPSELGNV 480 PYVYTDECSS WPSPTGDNDS SLPNKNSIPT NYDSKQVSNT ASNFENQTRS SEKQSFGDGS 540 TSSINTNYRY SSDQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10480.2 | 2e-28 | NAC family protein |