PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g683670.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 526aa    MW: 58772.3 Da    PI: 6.6363
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g683670.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.11.7e-27283337156
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                       k +++WtpeLH++Fv+aveqL G ++A+P++ilelmk +gLt+++v+SHLQkYR++
  Pd.00g683670.m01 283 KMKVDWTPELHKKFVQAVEQL-GVDQAIPSRILELMKAEGLTRHNVASHLQKYRMH 337
                       5689*****************.********************************96 PP
2Myb_DNA-binding44.82.8e-14286335248
                       SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                         WT+e+++++v+av+qlG +   +++I + m  +g+t+ ++ s++qky+
  Pd.00g683670.m01 286 VDWTPELHKKFVQAVEQLGVDqaIPSRILELMKaEGLTRHNVASHLQKYR 335
                       57***********************************************7 PP
3Response_reg29.24.6e-11201261109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl+ d++++ +  +++ le  +y +v+++ + +eal  +  +   +++ ++ ++ ++  G+ +++ +++++ +lp i+ +     +++ +++ 
  Pd.00g683670.m01  20 VLLLDEDNSSAAEIKSKLEAMDY-IVTTFCNETEALSAFSSNPqsFQVAIVEVNASN--GHGVFQFLETAK-DLPTIMTSNIHCLSTMMKCIA 108
                       7999999****************.***************776666999999988765..666788888877.9****9999999********* PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                       +Ga +fl Kp ++++l++
  Pd.00g683670.m01 109 LGAVEFLRKPLSEDKLRN 126
                       ***************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    
MVCTANDLQE WKDFPKGLKV LLLDEDNSSA AEIKSKLEAM DYIVTTFCNE TEALSAFSSN  60
PQSFQVAIVE VNASNGHGVF QFLETAKDLP TIMTSNIHCL STMMKCIALG AVEFLRKPLS  120
EDKLRNIWQH VVHKIKQETE EQKCKISVET ENVSRVHESD REQSVGSDKY PAPSTPQLKQ  180
GSRLLADGDC QDQINCLSEK ESGENDGESK SVETTCGNPI DEGTVQMSEP QMTRKRVVKE  240
ENDSVNGSQH PHNRNSANDV GGAAENLSKA SAPNNSCKSN RKKMKVDWTP ELHKKFVQAV  300
EQLGVDQAIP SRILELMKAE GLTRHNVASH LQKYRMHKRH ILPKEDDRRL PHPRDPIQRS  360
YYPQNQKPIM AFPPYHYNNS LSMAPVYPMW GQPGSQPAGV QMWGSPGFPQ WQPSESWHWK  420
PYQGMQADAW GCPVMPPLQG GYPSYPQNAA GFHAGVVDNG CSMQHNSFDL HPAEEVVDKV  480
VKEAISKPWL PLPLGLKPPS TEGVLDELSR QGICNIPPHI NRSNTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.31e-134ARR-B family protein