PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g682300.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARR-B

Protein Properties

Length: 545aa MW: 60489.6 Da PI: 6.0709

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g682300.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	62	1.2e-19	188	240	1	54
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 k r +WtpeLH +F a++ L G k Pk+il+lm+v+ +t+ +v+SHLQkY+ Pd.00g682300.m01 188 KHRAVWTPELHLKFTAALSAL-GDLKSRPKAILKLMNVPNITVRQVASHLQKYK 240 6899***************.9999*************************7 PP
2	Myb_DNA-binding	32	2.8e-10	192	240	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++ a lG ++k+I + m+ + t q+ s++qky+ Pd.00g682300.m01 192 VWTPELHLKFTAALSALGDLksRPKAILKLMNvPNITVRQVASHLQKYK 240 7***************77**************************7 PP
3	Response_reg	39.3	3.4e-14	6	79	36	109
HHHH..HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 36 lell..kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 l ++ ++ d+ l++ i+mp+md l +l+ ++++e +p+i+++++ + + a+++l Ga fl+Kp++ e+l Pd.00g682300.m01 6 LSMIteQKDDYKLVMANINMPDMDSLSFLRVLHKKE--IPVIFMSSEMNVNVAKKVLAEGACFFLEKPISLEDLKS 79 5555225556*********************988..********************************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MASVALSMIT EQKDDYKLVM ANINMPDMDS LSFLRVLHKK EIPVIFMSSE MNVNVAKKVL 60 AEGACFFLEK PISLEDLKSM WQHVYRKIRT PKHKPNCGTK MNSGKDCQGI KINEAGDVLR 120 PPLGGVKRNE AGGECSLATG HALDIDKQNT CTLTCKAQGA SGIKRPIDDK EEQEEVNRDS 180 NGTTGNKKHR AVWTPELHLK FTAALSALGD LKSRPKAILK LMNVPNITVR QVASHLQKYK 240 NQVQRIRGTD TTSLPSSLSR LSNCINRNEF PPVCQYDQRT SSFGVQGNTA QLDAPNSLIT 300 SPIPVAGFNN HDYRRQNLYS GHTILSHYTN HHTNNPSEFY LRTQGQFQNL NQIRETSSFG 360 YGAGMNEIMN QQPLGIEENS FRTSESHFPS MNYITPEAAA SPYISGNTFQ VPNEPSVMNQ 420 EQYYTSSLTG PFDSQNQNQF STEGARLTTE VLELVPEQIA SGNATNPNKF PADFNDGSQK 480 LDTTAGEASS PNENQPLSEY DQLLKLLEED PQEASCVGSV PNAGDADRYC EWLRETLLEN 540 STDPL

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MASVALSMIT EQKDDYKLVM ANINMPDMDS LSFLRVLHKK EIPVIFMSSE MNVNVAKKVL  60
AEGACFFLEK PISLEDLKSM WQHVYRKIRT PKHKPNCGTK MNSGKDCQGI KINEAGDVLR  120
PPLGGVKRNE AGGECSLATG HALDIDKQNT CTLTCKAQGA SGIKRPIDDK EEQEEVNRDS  180
NGTTGNKKHR AVWTPELHLK FTAALSALGD LKSRPKAILK LMNVPNITVR QVASHLQKYK  240
NQVQRIRGTD TTSLPSSLSR LSNCINRNEF PPVCQYDQRT SSFGVQGNTA QLDAPNSLIT  300
SPIPVAGFNN HDYRRQNLYS GHTILSHYTN HHTNNPSEFY LRTQGQFQNL NQIRETSSFG  360
YGAGMNEIMN QQPLGIEENS FRTSESHFPS MNYITPEAAA SPYISGNTFQ VPNEPSVMNQ  420
EQYYTSSLTG PFDSQNQNQF STEGARLTTE VLELVPEQIA SGNATNPNKF PADFNDGSQK  480
LDTTAGEASS PNENQPLSEY DQLLKLLEED PQEASCVGSV PNAGDADRYC EWLRETLLEN  540
STDPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68210.1	6e-38	ARR-B family protein