PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g675620.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 443aa MW: 48801.9 Da PI: 6.0516

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g675620.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1e-17	39	86	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed+ l ++v+++G g+W+++ r g++R++k+c++rw ++l Pd.00g675620.m01 39 KGPWTAAEDQTLMEYVRKHGEGNWNAVQRNSGLNRCGKSCRLRWANHL 86 79******************************************9986 PP
2	Myb_DNA-binding	23.5	1.3e-07	92	122	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g +++eE+ +++++++++G++ W++ a+ Pd.00g675620.m01 92 KGVFSPEEERRILELHAKYGNK-WARMASQTK 122 789*****************.*998655 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MTTNNGSIWE LHREGMLPPD SSGGGGGGNV VEGSDGLKKG PWTAAEDQTL MEYVRKHGEG 60 NWNAVQRNSG LNRCGKSCRL RWANHLRPNL KKGVFSPEEE RRILELHAKY GNKWARMASQ 120 TKPTTLTSFP PFDPINTITS SFSSSSTPSF TFNRPAPILG APLCHKRYRD SVVFSSPRFP 180 NLKRNTSMFR TRSMPDIASF QLTGSNSMPA TPSLTRTYSM SDNPSFEFPM TFDHSFPPLP 240 RSQFDFSDNF LSPAGSVYSV QSELPSNQVS QTQLQISIDN NLSSVAGATL AAADDETHSR 300 SGLLDDLLQE ADALEAYGGG NNSRTTNGIF GSSQEKHVLD GYDQWLQSTS SVDGHLNSMH 360 KDFSKLFGSI PSSESVSDWY SDSGEVSNAH SFGITDVSLD MQQMASMFPT DATAEHGRAS 420 SFREEEQLSY HMDMNKVLMT QYS

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MTTNNGSIWE LHREGMLPPD SSGGGGGGNV VEGSDGLKKG PWTAAEDQTL MEYVRKHGEG  60
NWNAVQRNSG LNRCGKSCRL RWANHLRPNL KKGVFSPEEE RRILELHAKY GNKWARMASQ  120
TKPTTLTSFP PFDPINTITS SFSSSSTPSF TFNRPAPILG APLCHKRYRD SVVFSSPRFP  180
NLKRNTSMFR TRSMPDIASF QLTGSNSMPA TPSLTRTYSM SDNPSFEFPM TFDHSFPPLP  240
RSQFDFSDNF LSPAGSVYSV QSELPSNQVS QTQLQISIDN NLSSVAGATL AAADDETHSR  300
SGLLDDLLQE ADALEAYGGG NNSRTTNGIF GSSQEKHVLD GYDQWLQSTS SVDGHLNSMH  360
KDFSKLFGSI PSSESVSDWY SDSGEVSNAH SFGITDVSLD MQQMASMFPT DATAEHGRAS  420
SFREEEQLSY HMDMNKVLMT QYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	7e-45	MYB family protein