PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g670920.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 294aa    MW: 31400.8 Da    PI: 7.4304
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g670920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.88e-111255445
                      S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      W+ e d+ + +a + ++ +   +W++Ia+ ++ g+t +++k+++ 
  Pd.00g670920.m01 12 WSREQDKAFENALATYPEDssdRWEKIAADVP-GKTIEEIKHHYE 55
                      ********************************.**********96 PP
2Myb_DNA-binding43.85.8e-14122166347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT++E+ l++ + +++G+g+W++I+r +  +Rt+ q+ s+ qky
  Pd.00g670920.m01 122 AWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKY 166
                       6*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MTVDEAGSSS LWSREQDKAF ENALATYPED SSDRWEKIAA DVPGKTIEEI KHHYELLVDD  60
INQIEAGFVP LPCYNSSSEG STSHASDEGT NKKGGHSGNY SSESNHGTKA SRADQERRKG  120
IAWTEDEHRL FLLGLEKYGK GDWRSISRNF VVTRTPTQVA SHAQKYFIRL NSMNKDRRRS  180
SIHDITSVNN GDISSPQGPI TGQANGSAVG SSGKSTKQSP AGPPGPGVGM YGAPTIGQPI  240
GGPLVSAVGT PVNLPAGPPH MAYGLRAPVP GGVVPGAPMN MVPMTYPMPH TSHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-120MYB family protein