PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g662670.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 203aa MW: 22588.4 Da PI: 8.1658 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 146.2 | 9.3e-46 | 12 | 111 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kll++l++++reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+ + Pd.00g662670.m01 12 PCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMD 104 7******************************************************************************************** PP DUF260 94 lallkee 100 l +k+e Pd.00g662670.m01 105 LTCAKSE 111 *999876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 203 aa Download sequence |
MMASSSSSSN SPCAACKFLR RKCQPECVFA PYFPPDQPQK FANVHKVFGA SNVTKLLNEL 60 HPHQREDAVN SLAYEADMRL RDPVYGCVGV ISLLQHQLRQ LQMDLTCAKS ELSKYQNLQH 120 GLTASHGGGG RDHYPHQFFP RDRDHQHQQQ MMIRSFDAGN NYDASLLAMN VSAAAGGIHG 180 QLTHQFQQPR AAAGDDRRAI DPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G65620.3 | 1e-74 | LBD family protein |