PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g660300.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GeBP

Protein Properties

Length: 428aa MW: 46627.3 Da PI: 4.534

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g660300.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	115.9	2.3e-36	130	229	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkife 90 lfqrlw++eDei lLqG++d+++ +g + ++d+ fy+++k++++++++k+qlveK+rrLKkK+++ +k++sgke+sf+++hdq +fe Pd.00g660300.m01 130 LFQRLWTDEDEIELLQGFLDYTTMRGNkgshHGQNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKIASGKEVSFKSPHDQATFE 222 79******************9999865433345****************************************************** PP DUF573 91 lskkiWg 97 +s+kiW Pd.00g660300.m01 223 ISRKIWS 229 ****6 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MAPDQDDAVL PEGDLSSSSQ DDEEEDDDEE EDDVDDDDDV LNDDVINSAS PSTSSAGATD 60 SLPVAIATPT VTVALPARDP PPLALATTTS TATTVIANDA VLSSDPKRHA VLSPQPEEKK 120 PAALDDSRRL FQRLWTDEDE IELLQGFLDY TTMRGNKGSH HGQNDTALFY DQIKSKLQLD 180 FNKNQLVEKL RRLKKKYRNV LNKIASGKEV SFKSPHDQAT FEISRKIWSN IGRIGPDDNA 240 LDDEDPSPNP NNPNFNNYEI KNEEAAGFAG DKKSTPRSRK RSRTQLRAEE KPPPSRGGFV 300 EPSPVIKDNN NSINNSNHGG GGGNSCSNCN VHGLIEETVK SCLSPLFKEL LSSAMGGGSA 360 RGFGGLSLNP IPLSFGGPSM NLNFGGGEGA DEKWRKQQIL ELEVYSKRLE LVQNQIKVAL 420 EELRSSRG

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MAPDQDDAVL PEGDLSSSSQ DDEEEDDDEE EDDVDDDDDV LNDDVINSAS PSTSSAGATD  60
SLPVAIATPT VTVALPARDP PPLALATTTS TATTVIANDA VLSSDPKRHA VLSPQPEEKK  120
PAALDDSRRL FQRLWTDEDE IELLQGFLDY TTMRGNKGSH HGQNDTALFY DQIKSKLQLD  180
FNKNQLVEKL RRLKKKYRNV LNKIASGKEV SFKSPHDQAT FEISRKIWSN IGRIGPDDNA  240
LDDEDPSPNP NNPNFNNYEI KNEEAAGFAG DKKSTPRSRK RSRTQLRAEE KPPPSRGGFV  300
EPSPVIKDNN NSINNSNHGG GGGNSCSNCN VHGLIEETVK SCLSPLFKEL LSSAMGGGSA  360
RGFGGLSLNP IPLSFGGPSM NLNFGGGEGA DEKWRKQQIL ELEVYSKRLE LVQNQIKVAL  420
EELRSSRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	7e-73	GeBP family protein