PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g657920.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 328aa MW: 37002.5 Da PI: 4.8976

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g657920.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.6	5.1e-09	259	291	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +L++ +gL+++q+ +WF N+R ++ Pd.00g657920.m01 259 PYPTEEEKLHLSEVTGLDQKQINNWFINQRKRH 291 8*****************************885 PP
2	ELK	36.2	1.3e-12	211	232	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL +L++EF+ Pd.00g657920.m01 211 ELKDMLLHKYSGYLTNLRKEFL 232 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MNMEDFYRLN PGVISGSEID VNVVHQVENM ATSTSNTSCG FHGHPHPQGH VVDDNMLLFQ 60 TEGMESDHHM SDLIKTQIAN HPRFPDLVDA YLECQKVGAP PEMKSLLEEI GRVSHPMSTC 120 SEIGADPELD EFMVLRGYKE ELSKPFDEAT NFLTNIQSQL RNLCKGTFPK TSWDCNSDEG 180 VGSSEEEFSC GEVEAAESQE TAAARSGGDR ELKDMLLHKY SGYLTNLRKE FLKKRKKGKL 240 PKDARTALLD WWTAHYRWPY PTEEEKLHLS EVTGLDQKQI NNWFINQRKR HWKPSEDMRF 300 ALMEGVGGSI GAPMLFDAGV GTGNIDDM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	227	236	LRKEFLKKRK
2	233	237	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-75	TALE family protein