PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g657020.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GeBP | ||||||||
Protein Properties | Length: 197aa MW: 22832.7 Da PI: 8.1884 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 61.3 | 2.4e-19 | 2 | 82 | 16 | 98 |
DUF573 16 LqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWgs 98 +G+i+f +k ++ d ++fy+ ++k i+++vs+ q+ +K+ rLKkK+++++++ +g++p+fsk+h+qk f+lsk+ Wgs Pd.00g657020.m01 2 VKGIISFLKK---FSTFDGKKFYNWINKYIEADVSRGQIADKVCRLKKKYRNNEANrGPNGEDPVFSKPHEQKLFDLSKQAWGS 82 5788888333...346699********************************99988689***********************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MVKGIISFLK KFSTFDGKKF YNWINKYIEA DVSRGQIADK VCRLKKKYRN NEANRGPNGE 60 DPVFSKPHEQ KLFDLSKQAW GSTSCTTNRT NTNADINDGI VEEGANDAQK KATDVVDDDI 120 LQEKEVLFDD NLVMEAFDKY LTSRGLDLRW FGQDKLESLE NKWRKIRVAE STFRLLQAKF 180 DAKVHQIALH AYNFFDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G11510.1 | 1e-12 | GeBP family protein |