PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g655810.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 847aa MW: 95875.1 Da PI: 7.454

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g655810.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.3	4.1e-21	84	174	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY++YA +GFs+r+s+ ++s + g ++ r++vCskeg+r+++ ++ ++ r++r+etr +C+a++ vk ++ + vtk+++eH+H la Pd.00g655810.m01 84 RFYCNYALAIGFSIRRSRLRRS-KGGVVMGRQWVCSKEGSRSKKWTNrDDMVRTPRKETRENCHATFAVKYCPkRDAYIVTKFVKEHSHGLA 174 5******************9.8889***********9988846677889*************999************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 847 aa Download sequence
MEAETSKTNG IQGQKSVLNS EGYFSEAESL EETENVPYLQ ILDSRTEEST EKSGQFEYDG 60 LNFQNMSIAD FAEREFAKVE EAERFYCNYA LAIGFSIRRS RLRRSKGGVV MGRQWVCSKE 120 GSRSKKWTNR DDMVRTPRKE TRENCHATFA VKYCPKRDAY IVTKFVKEHS HGLANSRETE 180 VAYKRLKAEF GRLNTLVETW KEQHEQTSLN LGCHNNIVRD PIVAKTKGKQ TTGSKGKKAP 240 QCGECKVTGH NKRNCPNRIV GEGGKRKRGY TRDMSNIQSS FGPEYDTSFG NKTFYSASSC 300 VHGTKTLSSS YTTPNSGFSC GEMSSGSTHY TSDGFTFEPP EYSVLESQFD TQDTSPRDCL 360 SVVNMGKKPS TNKSTSQNRC KGKGLVPTLV ARNTAVKGNN NRSVVTSQRG SSSTASHSNP 420 VDHPFFGVRR YTHKNHNSSD PVLHVNVTNH LSYKNNLTHI KGCGNNTLCG LWYRHELPPR 480 VQEKVASAGF ADFAILLGTK GRRDKHLLMA LAERWWDTTH TFHLDEVGEL TMTPKDFSAI 540 TGLPVCGKSL KYDMEAHTKT EEVVRLFGTP IRSILNAKMK YRDIVNKYKR WKPQTPEQED 600 QLTRVFILAV LGSSLCNDKS DSVYLYYMPS LAKVEEIKDY NWGGAGLACM YLSMDALSRG 660 LVTSIGGYWR AWEVWACEYL KPLALARPLS DVESFPRAYR WLSAPDVRDT SHKLEHFRTT 720 LRYISIDQGT HTQHKQNPLA TKENVEDEED EEDVEDEEDE EDEENVEDEE DEEHVEDEEV 780 EENRDEEDEV LVEETTTKSP PPNTKGKGVV AIKGKGKASP KKRKISLPEQ EPEPHPISKR 840 LRLRKKT

Sequence ? help Back to Top

Protein Sequence Length: 847 aa Download sequence

MEAETSKTNG IQGQKSVLNS EGYFSEAESL EETENVPYLQ ILDSRTEEST EKSGQFEYDG  60
LNFQNMSIAD FAEREFAKVE EAERFYCNYA LAIGFSIRRS RLRRSKGGVV MGRQWVCSKE  120
GSRSKKWTNR DDMVRTPRKE TRENCHATFA VKYCPKRDAY IVTKFVKEHS HGLANSRETE  180
VAYKRLKAEF GRLNTLVETW KEQHEQTSLN LGCHNNIVRD PIVAKTKGKQ TTGSKGKKAP  240
QCGECKVTGH NKRNCPNRIV GEGGKRKRGY TRDMSNIQSS FGPEYDTSFG NKTFYSASSC  300
VHGTKTLSSS YTTPNSGFSC GEMSSGSTHY TSDGFTFEPP EYSVLESQFD TQDTSPRDCL  360
SVVNMGKKPS TNKSTSQNRC KGKGLVPTLV ARNTAVKGNN NRSVVTSQRG SSSTASHSNP  420
VDHPFFGVRR YTHKNHNSSD PVLHVNVTNH LSYKNNLTHI KGCGNNTLCG LWYRHELPPR  480
VQEKVASAGF ADFAILLGTK GRRDKHLLMA LAERWWDTTH TFHLDEVGEL TMTPKDFSAI  540
TGLPVCGKSL KYDMEAHTKT EEVVRLFGTP IRSILNAKMK YRDIVNKYKR WKPQTPEQED  600
QLTRVFILAV LGSSLCNDKS DSVYLYYMPS LAKVEEIKDY NWGGAGLACM YLSMDALSRG  660
LVTSIGGYWR AWEVWACEYL KPLALARPLS DVESFPRAYR WLSAPDVRDT SHKLEHFRTT  720
LRYISIDQGT HTQHKQNPLA TKENVEDEED EEDVEDEEDE EDEENVEDEE DEEHVEDEEV  780
EENRDEEDEV LVEETTTKSP PPNTKGKGVV AIKGKGKASP KKRKISLPEQ EPEPHPISKR  840
LRLRKKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	3e-15	FAR1 family protein