PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g653430.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 349aa MW: 39318.3 Da PI: 8.7589

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g653430.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.8	1.5e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l+d+++++G g+W+t ++ g++R++k+c++rw +yl Pd.00g653430.m01 14 RGPWTPEEDKKLIDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWANYL 61 89********************************************97 PP
2	Myb_DNA-binding	54.6	2.5e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e++++++ lG++ W++Ia++++ gRt++++k++w+++ Pd.00g653430.m01 67 RGRFSFEEEEIIIQLHSVLGNK-WSAIASRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MGKIPCCEKN GLKRGPWTPE EDKKLIDYIQ KHGHGRWRTL PKNAGLKRCG KSCRLRWANY 60 LRPDIKRGRF SFEEEEIIIQ LHSVLGNKWS AIASRLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHTPRL DLLELSSAIC STLYNSSSPH NPQINVPNLL GIGPIMDPDL LNLATTFLSC 180 QQNQIGFSQI NQTQFQSQLT QPSHIQNPVQ EIQSCTTSNT LNVPFLSYPS SSNVAGQGFV 240 PTTNQLGSYD SKYESMISHI PHQNYNQPCT SNNVNQYQNF QNMSSFGSVL SSTPSSSPAT 300 TLNSSPAITY VNSSTEDERD SFCSNILMYH DIPNALNATR LLYQKNIIN

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MGKIPCCEKN GLKRGPWTPE EDKKLIDYIQ KHGHGRWRTL PKNAGLKRCG KSCRLRWANY  60
LRPDIKRGRF SFEEEEIIIQ LHSVLGNKWS AIASRLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHTPRL DLLELSSAIC STLYNSSSPH NPQINVPNLL GIGPIMDPDL LNLATTFLSC  180
QQNQIGFSQI NQTQFQSQLT QPSHIQNPVQ EIQSCTTSNT LNVPFLSYPS SSNVAGQGFV  240
PTTNQLGSYD SKYESMISHI PHQNYNQPCT SNNVNQYQNF QNMSSFGSVL SSTPSSSPAT  300
TLNSSPAITY VNSSTEDERD SFCSNILMYH DIPNALNATR LLYQKNIIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-101	MYB family protein