PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g653260.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 308aa    MW: 34147.4 Da    PI: 6.9221
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g653260.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.69.6e-18187285195
                       EEEE-..-HHHHT.T-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlks.grlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k lt sd++ + +rlv+pkk+ae+h  ++++++++ + ++d +gr W+++++ +++s++   yvl+ G k++   n+ ++gD+v+F++++ 
  Pd.00g653260.m01 187 FEKSLTASDTFLNtARLVIPKKCAEAHfpKISETQGFPIAIQDYTGRDWKFQYRCWQNSNSkkmYVLE-GLKDYMILNQWQVGDTVTFHRTE- 277
                       899******998779**************99999*******************885555555548888.********************654. PP

                       SEE..EEE CS
                B3  88 sefelvvk 95 
                       +e++l ++
  Pd.00g653260.m01 278 QEGKLIIG 285
                       67767766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MASMASEHCF FCKAEMAEFI TGWPLKDGSF AKLCGKCGYA YIHDQFCETF HSKSDGWRHC  60
DGCKKKNHWN EVVITDSSQS STFSAANEGT YLTTLSDSDT HSVVSNEIIA ECCSPGSSKG  120
KASAHIGENS NVDSSGHTGC EGVESETPPV DASTQNHLYP QSLLKMTSHE QLQKISGKSN  180
IDAIPLFEKS LTASDTFLNT ARLVIPKKCA EAHFPKISET QGFPIAIQDY TGRDWKFQYR  240
CWQNSNSKKM YVLEGLKDYM ILNQWQVGDT VTFHRTEQEG KLIIGTKKTP ASIASVQALK  300
EKIWKLLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30470.11e-40B3 family protein