PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g649370.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 468aa MW: 52927.4 Da PI: 4.6217

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g649370.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	77.8	1.2e-24	380	430	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++++l+dl+ y +lpi++AA+ L+vc+Tv+KriCR++G++RWP+Rki+s+ Pd.00g649370.m01 380 TANMTLDDLRDYVHLPIEKAARRLNVCPTVVKRICRRNGLRRWPSRKITSI 430 789*********************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MLLLLRDLAG AIGARKDGRG ERGFGCSQME REREEEEDEA QCSQAPKYQT LVLEAFRSLS 60 LYAPLAKLKP KKGQKPFTLS GDFEESCSLV ERYNLRMADP RAVVPYHDPY YSGPYTEIMN 120 LLNDSEHPRI DENNIPPLEG SLASPNPTPM FDEEIQDVDE PLMDQAMWDF IYGSDNGGEG 180 INSQAGPSQI FTESSGTNPP RGDGNEQNHG FGNVRPLSVW PLPSDPINCT FCQVFREIVH 240 FNSDNVMKLE IHGRLGVICH AILQSRPNAN LNSSGNHQYQ MLDFCKTPGE EVKQFLMQYC 300 LERKLEGYIM QQDPLTFFYE ALCVGVDWDA ILNPTDDFDF PPSPSDSGDT EKPAEVQPEA 360 AEHEIETNPR ISLAEQRERT ANMTLDDLRD YVHLPIEKAA RRLNVCPTVV KRICRRNGLR 420 RWPSRKITSI NRQISRLRPS LDSDDAETRV HAEAEISRLG REIAELVP

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MLLLLRDLAG AIGARKDGRG ERGFGCSQME REREEEEDEA QCSQAPKYQT LVLEAFRSLS  60
LYAPLAKLKP KKGQKPFTLS GDFEESCSLV ERYNLRMADP RAVVPYHDPY YSGPYTEIMN  120
LLNDSEHPRI DENNIPPLEG SLASPNPTPM FDEEIQDVDE PLMDQAMWDF IYGSDNGGEG  180
INSQAGPSQI FTESSGTNPP RGDGNEQNHG FGNVRPLSVW PLPSDPINCT FCQVFREIVH  240
FNSDNVMKLE IHGRLGVICH AILQSRPNAN LNSSGNHQYQ MLDFCKTPGE EVKQFLMQYC  300
LERKLEGYIM QQDPLTFFYE ALCVGVDWDA ILNPTDDFDF PPSPSDSGDT EKPAEVQPEA  360
AEHEIETNPR ISLAEQRERT ANMTLDDLRD YVHLPIEKAA RRLNVCPTVV KRICRRNGLR  420
RWPSRKITSI NRQISRLRPS LDSDDAETRV HAEAEISRLG REIAELVP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	3e-14	Nin-like family protein