PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g636020.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 346aa    MW: 38561.6 Da    PI: 5.0255
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g636020.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66e-102763161055
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+RR++iN ++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Pd.00g636020.m01 276 RKRREKINARLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 316
                       9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MYTSDEEADF MSQLLANCSV TNEMNEASSS SIPFAICPSH GYSTTNREDI DQGSHYFSDF  60
ANLYFSNGID TYGTANNGNY YTSDSHQIMP TNYHNSETFR GLWDANGANL FLSQGEQFGM  120
DHHQELRNGN VEEHCNTNQT GAAFSEKLLQ LKRESQHEMR IREPEMEIEV MVPENSKKRP  180
CSSVEVQKKK RNVKSKKGQK PVLTGDIEDN DASTKGQSSS STSCSGDEDS NASHQDLSGG  240
VSPSSLSPKG IEDLNLNCEK KVGRGSATDS QSIYARKRRE KINARLRILQ NLVPNGTKVD  300
ISTMLEEAVQ YVKFLQLQIK LLSSDDMWMY APIVYNGINI GIELNS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177191KKRPCSSVEVQKKKR
2276281RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-48bHLH family protein