PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g634420.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 378aa MW: 42366.7 Da PI: 4.3797

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g634420.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	79.3	8.2e-25	10	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lp+Gf+F+P+d++l+ +yL +kv+g+++ ++vi+e+d+y k+ePwd+ + + a+ +++yfF+k ++ + +++r r++ sg+Wk Pd.00g634420.m01 10 LPVGFKFRPSDDQLLGYYLLNKVRGTSFMYDNVIPEMDLYsKIEPWDIWHeygghNNLAKGEDLYFFTKLKSLSDKDSRVARTIGSGTWKGEN 102 79************************99999*99357*7434443222356789**********************998 PP NAM 88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + v + ++++ g+ k + + + ++ + W+mhey+l Pd.00g634420.m01 103 SGTVVSDPknEESDLGIWKRFHYE--NPKSVQDGCWIMHEYSL 143 877777765566669999998886..566667999****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MAPCESVVNL PVGFKFRPSD DQLLGYYLLN KVRGTSFMYD NVIPEMDLYS KIEPWDIWHE 60 YGGHNNLAKG EDLYFFTKLK SLSDKDSRVA RTIGSGTWKG ENSGTVVSDP KNEESDLGIW 120 KRFHYENPKS VQDGCWIMHE YSLHPSLVKP TNQFVLCRIR KNDRGKRKLR TAEEDNETDT 180 PVQSQNKRQR LQQVTSFEEL IGNCTPMSEA TGVGGSVSYL PTELTQSQPA SSFAYPTTMV 240 SSQARANYTD EINQFHGAGE GNALMSDFSH LDTAQPFTEQ ALGSYAVCNQ ERASDVYETQ 300 QGLGLTDNNI GYWPSTFGSE EDQVNAIDFS MDYDLLNHLI NCDDDNDGPQ QSSTAQFMGM 360 GMENTTTASS EVNMVIID

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MAPCESVVNL PVGFKFRPSD DQLLGYYLLN KVRGTSFMYD NVIPEMDLYS KIEPWDIWHE  60
YGGHNNLAKG EDLYFFTKLK SLSDKDSRVA RTIGSGTWKG ENSGTVVSDP KNEESDLGIW  120
KRFHYENPKS VQDGCWIMHE YSLHPSLVKP TNQFVLCRIR KNDRGKRKLR TAEEDNETDT  180
PVQSQNKRQR LQQVTSFEEL IGNCTPMSEA TGVGGSVSYL PTELTQSQPA SSFAYPTTMV  240
SSQARANYTD EINQFHGAGE GNALMSDFSH LDTAQPFTEQ ALGSYAVCNQ ERASDVYETQ  300
QGLGLTDNNI GYWPSTFGSE EDQVNAIDFS MDYDLLNHLI NCDDDNDGPQ QSSTAQFMGM  360
GMENTTTASS EVNMVIID

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	170	RGKRKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17260.1	4e-18	NAC family protein