PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g632710.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRAS

Protein Properties

Length: 573aa MW: 63133.6 Da PI: 4.7077

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g632710.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	218.8	2.8e-67	361	569	1	211
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 l++lL+ cA+avs++d + a++lL+++++++sp gd qRla++f+++L+arla++++++y al++++ts ++ l+a++ + ++P+ k+ Pd.00g632710.m02 361 LRTLLILCAQAVSADDRRTANELLKQIRQHSSPFGDGSQRLAHCFANGLEARLAGTGTQIYTALSSKRTS---AADMLKAYQNYIAACPFTKV 450 5789**********************************************************999999...9*************** PP GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184 + + aN++I + +e++e++HiiDf+i +G+QWpaL++ L+ R++gpp+lRiTg++ p+sg +e+++etg+rLak++e+ +vpfe+++ +ak Pd.00g632710.m02 451 AIIFANHMISKLAEKAETLHIIDFGILYGFQWPALIHCLSIRAGGPPKLRITGIELPQSGfrPEERVQETGHRLAKYCERYNVPFEYTA-IAK 542 *******************************************************9*************************.7 PP GRAS 185 rledleleeLrvkpgEalaVnlvlqlh 211 ++e++++eeL+vk++E+laVn+ ++ Pd.00g632710.m02 543 KWETIQIEELKVKRDEVLAVNCLFRSD 569 ***********************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MDPGFSQLPN SSLSSGDQTL SPNFNEYPSS DPFVDLSFLD QNPSNSALSP SLSPEGDDND 60 YSDSVLKYIN QVLMEEDMVT KPCMFHDPLA VQAAEKSLYE VLGEKYPPSP DQHPLNIESP 120 DCPFSVTFSD FSAINSSSSS NSHSVDSRWS NADVIENKPS ILETPIPDNF VFQSTSKPRS 180 QLSSNGNGNG LVGSYMSELM VSNLFSESEL VLQFNRGVEE ASKFLPRGQF IVDVEKNKPY 240 SVASGKAEDV VVKTEKDDIE LLATSSRGKK SHEREDTDLE DGRSNKQSAV YLEDTEAELS 300 EIFDKVLLCG GGKAEPFVCG GEEVCQDEAN KALQQNGQSV GTGNGKTRAK KKGDKKEVVD 360 LRTLLILCAQ AVSADDRRTA NELLKQIRQH SSPFGDGSQR LAHCFANGLE ARLAGTGTQI 420 YTALSSKRTS AADMLKAYQN YIAACPFTKV AIIFANHMIS KLAEKAETLH IIDFGILYGF 480 QWPALIHCLS IRAGGPPKLR ITGIELPQSG FRPEERVQET GHRLAKYCER YNVPFEYTAI 540 AKKWETIQIE ELKVKRDEVL AVNCLFRSDE IDV

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MDPGFSQLPN SSLSSGDQTL SPNFNEYPSS DPFVDLSFLD QNPSNSALSP SLSPEGDDND  60
YSDSVLKYIN QVLMEEDMVT KPCMFHDPLA VQAAEKSLYE VLGEKYPPSP DQHPLNIESP  120
DCPFSVTFSD FSAINSSSSS NSHSVDSRWS NADVIENKPS ILETPIPDNF VFQSTSKPRS  180
QLSSNGNGNG LVGSYMSELM VSNLFSESEL VLQFNRGVEE ASKFLPRGQF IVDVEKNKPY  240
SVASGKAEDV VVKTEKDDIE LLATSSRGKK SHEREDTDLE DGRSNKQSAV YLEDTEAELS  300
EIFDKVLLCG GGKAEPFVCG GEEVCQDEAN KALQQNGQSV GTGNGKTRAK KKGDKKEVVD  360
LRTLLILCAQ AVSADDRRTA NELLKQIRQH SSPFGDGSQR LAHCFANGLE ARLAGTGTQI  420
YTALSSKRTS AADMLKAYQN YIAACPFTKV AIIFANHMIS KLAEKAETLH IIDFGILYGF  480
QWPALIHCLS IRAGGPPKLR ITGIELPQSG FRPEERVQET GHRLAKYCER YNVPFEYTAI  540
AKKWETIQIE ELKVKRDEVL AVNCLFRSDE IDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07530.1	0.0	GRAS family protein