PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g632710.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 736aa    MW: 82467.1 Da    PI: 5.2472
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g632710.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS384.71.1e-1173617311373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL+ cA+avs++d + a++lL+++++++sp gd  qRla++f+++L+arla++++++y al++++ts    ++ l+a++ +  ++P+ k+
  Pd.00g632710.m01 361 LRTLLILCAQAVSADDRRTANELLKQIRQHSSPFGDGSQRLAHCFANGLEARLAGTGTQIYTALSSKRTS---AADMLKAYQNYIAACPFTKV 450
                       5789************************************************************999999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       + + aN++I + +e++e++HiiDf+i +G+QWpaL++ L+ R++gpp+lRiTg++ p+sg   +e+++etg+rLak++e+ +vpfe+++ +ak
  Pd.00g632710.m01 451 AIIFANHMISKLAEKAETLHIIDFGILYGFQWPALIHCLSIRAGGPPKLRITGIELPQSGfrPEERVQETGHRLAKYCERYNVPFEYTA-IAK 542
                       ***********************************************************9*****************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e++++eeL+vk++E+laVn+ ++ ++llde+v+++s+rd+vL+l+++++P+++v+   + ++ ++ F++rf eal ++salfd++++++pr
  Pd.00g632710.m01 543 KWETIQIEELKVKRDEVLAVNCLFRFKNLLDETVAVNSPRDAVLNLIRRMNPDIFVHGIINGSYHAPFFVTRFREALFHFSALFDMFDTNVPR 635
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       e+  r + E+e+lgre+vn +aceg+er+ r et+++W+ r ++aGFk++pl+ + +++ ++ ++  + + + v+e+ +++++gWk+r ++  
  Pd.00g632710.m01 636 EDPMRLMFEEEFLGREVVNTIACEGSERVVRPETYKQWQVRNMRAGFKQLPLDRELMNKLRMKVKLGYHRDFVVDEDGNWMLQGWKGRIIYCS 728
                       ********************************************************************999********************** PP

              GRAS 371 SaW 373
                       S+W
  Pd.00g632710.m01 729 SCW 731
                       *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 736 aa     Download sequence    
MDPGFSQLPN SSLSSGDQTL SPNFNEYPSS DPFVDLSFLD QNPSNSALSP SLSPEGDDND  60
YSDSVLKYIN QVLMEEDMVT KPCMFHDPLA VQAAEKSLYE VLGEKYPPSP DQHPLNIESP  120
DCPFSVTFSD FSAINSSSSS NSHSVDSRWS NADVIENKPS ILETPIPDNF VFQSTSKPRS  180
QLSSNGNGNG LVGSYMSELM VSNLFSESEL VLQFNRGVEE ASKFLPRGQF IVDVEKNKPY  240
SVASGKAEDV VVKTEKDDIE LLATSSRGKK SHEREDTDLE DGRSNKQSAV YLEDTEAELS  300
EIFDKVLLCG GGKAEPFVCG GEEVCQDEAN KALQQNGQSV GTGNGKTRAK KKGDKKEVVD  360
LRTLLILCAQ AVSADDRRTA NELLKQIRQH SSPFGDGSQR LAHCFANGLE ARLAGTGTQI  420
YTALSSKRTS AADMLKAYQN YIAACPFTKV AIIFANHMIS KLAEKAETLH IIDFGILYGF  480
QWPALIHCLS IRAGGPPKLR ITGIELPQSG FRPEERVQET GHRLAKYCER YNVPFEYTAI  540
AKKWETIQIE ELKVKRDEVL AVNCLFRFKN LLDETVAVNS PRDAVLNLIR RMNPDIFVHG  600
IINGSYHAPF FVTRFREALF HFSALFDMFD TNVPREDPMR LMFEEEFLGR EVVNTIACEG  660
SERVVRPETY KQWQVRNMRA GFKQLPLDRE LMNKLRMKVK LGYHRDFVVD EDGNWMLQGW  720
KGRIIYCSSC WVPSRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein