PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g632670.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GRAS | ||||||||
Protein Properties | Length: 709aa MW: 80142.8 Da PI: 5.8077 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 380.6 | 1.9e-116 | 336 | 707 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 +lL++cA+av+s d++ a++lL+++++++sp+gd++qR a+yf+ +L+arla+ + y+ l + + s +e l+a+++++ sP+ k+s Pd.00g632670.m01 336 STLLTQCAQAVASYDQRTASELLKQIRQHSSPYGDATQRSAHYFADGLEARLAGARTPSYSPLVSMQIS---AAEILKAHEVYVTSSPFKKMS 425 579***************************************************999999999999998...9******************** PP GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185 +++aN++Il+ +e+++r+H+iDf+is+G+QWp++++ L++Rp+gpp+lRiT+++ p++g +e++eetg+rL+k+Ae+++vpfe+nv +a++ Pd.00g632670.m01 426 NFLANRTILKLAEKATRLHVIDFGISYGFQWPCFIHRLSERPGGPPKLRITAIELPQPGfrPTERVEETGRRLEKYAERFNVPFEYNV-IAQK 517 **********************************************************9****************************9.7*** PP GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278 +e++++e+Lr++++E ++Vn++ +l++++de+v ++s+rd vLkl+k+++P+++v+ + +ns+ F++rf eal ++salfd++ea +p+e Pd.00g632670.m01 518 WETIQFEDLRIDRNELIVVNCMNRLKHIPDETVMVNSPRDIVLKLIKKINPDLFVHGVVNGTYNSPFFVTRFKEALFHFSALFDMFEACVPHE 610 ********************************************************************************************* PP GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsv 370 +e r E+++ gr+i nvvaceg er+er et+++W+ r +aGFk++pl+++ k++k++l+ ++ + +r++e+ +++++gWk+r ++ Pd.00g632670.m01 611 DERRLLFEKAVYGRDILNVVACEGLERVERPETYKQWQVRNVRAGFKQLPLDQELLKSVKRMLKFMGyHNDFRIDEDGHWMLQGWKGRITRAL 703 ****************************************************************9999999********************** PP GRAS 371 SaWr 374 S+W+ Pd.00g632670.m01 704 SFWK 707 ***8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 709 aa Download sequence |
MDTLPERYYL SMERFNFGHG SASLDSNQNL VNGFQVNQES TSPVRLSTNL DHPSDSSTSL 60 SSGSDGDTID FSDYNHPVLK YVSDILLEED LEGKTCMLQD CLALQAAEKS FYDVLNQEDP 120 PSPNQLPPSV HQSFENSDDD SSHSCRRSNG SIAANTDLVF DPSETSNVQS SLVQSLSDAG 180 LVSDSLSEMH SLGHSGGLGE ASKFLPNVKL EGNRLMPPGL DQWPSSTNIL MTTPDNDGYN 240 STNGSKGKKN HQREDADYPE EGRSNKQPVA FADDSEPQEM FDEVLLCHGN HEFESCSPDE 300 SLITEGSGKL QRNKQKGSKT ARSKKQNNNW ELVDLSTLLT QCAQAVASYD QRTASELLKQ 360 IRQHSSPYGD ATQRSAHYFA DGLEARLAGA RTPSYSPLVS MQISAAEILK AHEVYVTSSP 420 FKKMSNFLAN RTILKLAEKA TRLHVIDFGI SYGFQWPCFI HRLSERPGGP PKLRITAIEL 480 PQPGFRPTER VEETGRRLEK YAERFNVPFE YNVIAQKWET IQFEDLRIDR NELIVVNCMN 540 RLKHIPDETV MVNSPRDIVL KLIKKINPDL FVHGVVNGTY NSPFFVTRFK EALFHFSALF 600 DMFEACVPHE DERRLLFEKA VYGRDILNVV ACEGLERVER PETYKQWQVR NVRAGFKQLP 660 LDQELLKSVK RMLKFMGYHN DFRIDEDGHW MLQGWKGRIT RALSFWKKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G29060.1 | 0.0 | GRAS family protein |