PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g632640.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 659aa    MW: 74591.5 Da    PI: 6.9742
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g632640.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS380.81.7e-1162866552372
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL+ecA+av s d++ a++lL+++++++sp+g ++qR+a+yf+e+L+arla+  s  y+ l   +ts   ++e l+a+++++ ++P+ k+ 
  Pd.00g632640.m01 286 CKLLTECAQAVGSYDQQSASELLKQIRQHSSPYGYATQRVAHYFAEGLEARLAGARSLSYAPLLIMHTS---TTEILKAYQVYVSACPFKKML 375
                       589***************************************************888888888888887...89******************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       h+ aN++I++ +e+++r+HiiDf+is+GlQWp+L+q+L+++++gpp+lRiT+++ p++g   +e++eetg+rLak+ ++ gvpfe+nv +ak+
  Pd.00g632640.m01 376 HFFANRTIMKQTEKATRLHIIDFGISYGLQWPCLIQSLSEKTGGPPNLRITAIEFPQPGfrPAERIEETGRRLAKYSKRYGVPFEYNV-IAKK 467
                       **********************************************************9****************************9.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +e+++leeL+++++E+++Vn++++l++++de+v ++++rd+vL+l+k+++P+++ +   +  +n++ F++rf + l ++ alfd++ea++pr+
  Pd.00g632640.m01 468 WETIRLEELQIDRNEVIVVNCMHRLKQIPDETVMMNNPRDAVLNLIKRINPDLFMHGVVNGTYNAPAFVTRFKQLLFHFHALFDMYEATVPRD 560
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsv 370
                       +e+r   Er+++gr+i+nv+aceg er+er et+++W++r  +aGFk++pl+ +  k++k++ ++++  + + +e++ +++++gWk+r +v++
  Pd.00g632640.m01 561 NEHRLLFERAIFGRDIMNVIACEGLERVERPETYKQWQARYVRAGFKQLPLDRELFKKVKTMSKMMGyHKDFGIEDDGEWMLQGWKGRIIVAL 653
                       ******************************************************************99999********************** PP

              GRAS 371 Sa 372
                       Sa
  Pd.00g632640.m01 654 SA 655
                       98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 659 aa     Download sequence    
MEELNFGHGS NSVSSDQNLV SGLQVNHEPT NKLLLPANLD RPSDSRTSSE GDTVDSSDCN  60
LPVLKYISDI LLEEDLEGKP CMLEDILGLQ AAEKSFYDAL NQKDPPLPNQ PFSVYQSFEN  120
SDGGFQSSNG SISGFQSSNG SIAAKTGSVW DFSETSHVQT SLVELLSDTT LVSDSFSDTQ  180
SLGNFRGIWH PCQRIMATTQ QMDQRERRII KGRSNKQSAA FADDSDLQEM FDKVLQGVNP  240
ESESCFHDES LNAEGTRKLQ HNKQSKGSKT TCSKKPNSNR QVVDLCKLLT ECAQAVGSYD  300
QQSASELLKQ IRQHSSPYGY ATQRVAHYFA EGLEARLAGA RSLSYAPLLI MHTSTTEILK  360
AYQVYVSACP FKKMLHFFAN RTIMKQTEKA TRLHIIDFGI SYGLQWPCLI QSLSEKTGGP  420
PNLRITAIEF PQPGFRPAER IEETGRRLAK YSKRYGVPFE YNVIAKKWET IRLEELQIDR  480
NEVIVVNCMH RLKQIPDETV MMNNPRDAVL NLIKRINPDL FMHGVVNGTY NAPAFVTRFK  540
QLLFHFHALF DMYEATVPRD NEHRLLFERA IFGRDIMNVI ACEGLERVER PETYKQWQAR  600
YVRAGFKQLP LDRELFKKVK TMSKMMGYHK DFGIEDDGEW MLQGWKGRII VALSALKPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-168GRAS family protein