PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g632630.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 738aa    MW: 83838.6 Da    PI: 6.5542
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g632630.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS339.65.5e-1043356553324
              GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                       +lL++cA+av+s d++ a++lL+++++++sp+gd+ +Rla+yf+ +L+arla++ +  y++l + +t+    +e l+a++l++  +P+ k+ h
  Pd.00g632630.m01 335 TLLTQCAQAVASYDQRTASELLKQIRKHSSPYGDAAERLAHYFADGLEARLAGTRTPSYSSLLSIQTP---AAEILKAYQLYVTHCPYKKMLH 424
                       69***************************************************888889898888887...89******************** PP

              GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                       +  N++I++ +e+++r+HiiDf+is+G+QWp+++q L++Rp+gpp++R+T+++ p++g   +e++eetg+rL k+A++++vpf+++v +a+++
  Pd.00g632630.m01 425 FFSNRTIMKLAEKATRLHIIDFGISYGFQWPCFIQRLSKRPGGPPNIRMTAIELPQPGfrPTERVEETGRRLDKYAKRFNVPFQYKV-IAQKW 516
                       *********************************************************9****************************9.7**** PP

              GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
                       e++++e+L+++++E ++Vn++++l++++de+v  +s+rd+vLkl+k+++P++ +    +  +ns+ Fl+rf eal ++sa fd++ea++pre+
  Pd.00g632630.m01 517 ETIQFEDLKIDRDELIVVNCMHRLKHIPDETVMASSPRDTVLKLIKRINPDLYIRGVINGAYNSPFFLTRFREALFHFSAQFDMFEATIPRED 609
                       ********************************************************************************************* PP

              GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerlee.aGF 324
                       e+r + E++++g++i+nv+aceg er+er et+++Wr r ++  GF
  Pd.00g632630.m01 610 EQRLMFEKAVFGKDIMNVIACEGLERVERPETYKQWRVRYQRaIGF 655
                       ***************************************9883466 PP
Sequence ? help Back to Top
Protein Sequence    Length: 738 aa     Download sequence    
MDTLLERLSV SKEKFHFGHG SIPVHSNQNL VNGFQINHEP TNPPFLPSNS DHPSDSSTSL  60
SSGSDGDTFD ISDCSQLVLK YISDIILEED LEGKPCMLQD CLALQAAEKS FYDVLNQKDP  120
PSPNQPPLSD HQSFENSDDD STHSCHRSND YRAEKTDWVS DSSETSQVQS SLVESPPDTL  180
LASDSLYGNF GGVGEARKLL PNENFGIIDL EKYQLMSQGP NTLFRNLASK RENDGYNSTN  240
RSKEKKNHER EDGDYAEEGR SNKQSAASAD DSEPQEMFDK VLLCSVNHES ESCSHDEPLK  300
NEGSGKLKPN KQSKGSKTAR SKKQNNKREV VDFSTLLTQC AQAVASYDQR TASELLKQIR  360
KHSSPYGDAA ERLAHYFADG LEARLAGTRT PSYSSLLSIQ TPAAEILKAY QLYVTHCPYK  420
KMLHFFSNRT IMKLAEKATR LHIIDFGISY GFQWPCFIQR LSKRPGGPPN IRMTAIELPQ  480
PGFRPTERVE ETGRRLDKYA KRFNVPFQYK VIAQKWETIQ FEDLKIDRDE LIVVNCMHRL  540
KHIPDETVMA SSPRDTVLKL IKRINPDLYI RGVINGAYNS PFFLTRFREA LFHFSAQFDM  600
FEATIPREDE QRLMFEKAVF GKDIMNVIAC EGLERVERPE TYKQWRVRYQ RAIGFCRDGK  660
EEPLWLFPFG KKPRPLLKSL VSLLLNFSFN LPCIYEVVFT VLSCCNEFIV NFIYSSLPMG  720
ALSGICNIFL SKLEQSTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-161GRAS family protein