PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g631920.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 445aa    MW: 49292.2 Da    PI: 5.4465
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g631920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS291.91.7e-89464312373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilk 92 
                       ++lLl+cA a++s+d +laq++++ l++ as+ gdp+qRl++ +++AL +r ++ +++ ++ ++ s++s++  ++++++++l  ++++ P+++
  Pd.00g631920.m01  46 EKLLLHCASALESNDVTLAQQVMWVLNNVASSVGDPNQRLTSWILRALISRASKVCPTPMN-FNGSTSSSTIPTRVMSVTELagYVDLIPWHR 137
                       689***************************************************8877775.5555555555667777777788********* PP

              GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvlv 182
                       f++ + N+aI +a++g+ +vHi+Df+i++++QWp+L++aLa+Rpegpp lR+T+ +   ++    + + ee+g rL +f +  +vpfefnv+ 
  Pd.00g631920.m01 138 FGYCASNSAIFKAIQGCPKVHILDFSITHCMQWPTLIDALAKRPEGPPLLRVTVPNWRPQVpplLNVSSEEVGLRLGNFSRFKDVPFEFNVIE 230
                       *****************************************************998755558899999***********************94 PP

              GRAS 183 ak.rledl.....eleeLrvkpgEalaVnlvlqlhrlldesvsles......erdevLklvkslsPkvvvvveqeadhnsesFlerflealey 263
                        + +le l     ++++L+++ +E+l+Vn++  l +l de+ + +        r+++L++++sl+P+++vvv++++d++++s+  r++ +++y
  Pd.00g631920.m01 231 NSsSLELLlstqlNPSSLDLRDDEVLVVNCQNWLRYLSDEPRCGSPghqdgsMRNTFLNMIRSLNPRIIVVVDEDSDLSAPSLSSRITTCFNY 323
                       4436665556666999**********************66544332223334677************************************** PP

              GRAS 264 ysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesg 356
                       ++  fdsle+ lp++s +r+ +E   +g +i+n++  eg +r+e+ et    ++r++++GF ++p+ e+++k++k ll +++  g+ ++ e++
  Pd.00g631920.m01 324 MWIPFDSLETFLPKDSTQRMDYESD-VGHKIENIIGFEGHQRIEKLETGVAMSQRIRNVGFLSAPFCEETVKEVKGLLDEHA-SGWGMKREED 414
                       *************************.********************************************************.889999999* PP

              GRAS 357 slvlgWkdrpLvsvSaW 373
                        lvl+Wk+++ v+++aW
  Pd.00g631920.m01 415 MLVLTWKGHNSVFATAW 431
                       ***************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    
MKTEVRGSTT SISLQNPTTI FNTSQGASLT GALKGCLGSL DGACIEKLLL HCASALESND  60
VTLAQQVMWV LNNVASSVGD PNQRLTSWIL RALISRASKV CPTPMNFNGS TSSSTIPTRV  120
MSVTELAGYV DLIPWHRFGY CASNSAIFKA IQGCPKVHIL DFSITHCMQW PTLIDALAKR  180
PEGPPLLRVT VPNWRPQVPP LLNVSSEEVG LRLGNFSRFK DVPFEFNVIE NSSSLELLLS  240
TQLNPSSLDL RDDEVLVVNC QNWLRYLSDE PRCGSPGHQD GSMRNTFLNM IRSLNPRIIV  300
VVDEDSDLSA PSLSSRITTC FNYMWIPFDS LETFLPKDST QRMDYESDVG HKIENIIGFE  360
GHQRIEKLET GVAMSQRIRN VGFLSAPFCE ETVKEVKGLL DEHASGWGMK REEDMLVLTW  420
KGHNSVFATA WVANGPNPNG LLMED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-119GRAS family protein