PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g628740.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GeBP
Protein Properties Length: 387aa    MW: 42370.8 Da    PI: 9.6055
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g628740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57399.62.9e-31155245497
            DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 
                        rlwse+Dei++L+G+i+++ k+     + + af+ef+kk+++++vsk ql++KirrLK K++kk ++   g++p+fsk+h+ k+f+lskk+W
  Pd.00g628740.m01 155 GRLWSEDDEIAILKGMIEYQVKNVPVTNSTMGAFHEFIKKKLQVDVSKLQLSDKIRRLKMKYQKKGEN---GEDPVFSKPHEVKSFDLSKKVW 244
                       59*****************8888878888**********************************99999...********************** PP

            DUF573  97 g 97 
                       g
  Pd.00g628740.m01 245 G 245
                       8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MAPKKLLDDP PVVEDSDEET KEKPSSKKAL LTSSSAVSNS NPQWPSASED DSGSGSETES  60
ENNSQSPSAS DFTVKPIVSK PMNDTVKPNK KNAPAKPAPA SNSGSKRPET EPNKKNAPSS  120
SNSGSKRRAE TEPNPKDSKK KKVVNSGDDD DGKKGRLWSE DDEIAILKGM IEYQVKNVPV  180
TNSTMGAFHE FIKKKLQVDV SKLQLSDKIR RLKMKYQKKG ENGEDPVFSK PHEVKSFDLS  240
KKVWGVEANG VDDNAKDSKR KPRKSNKVDK ATVLALPVSD VAPVSDVAEK KEELNVANGG  300
IKADPEDFWS KYPCLSGSLG LDNSTPRSDL TTLMIQKMPL IGKSKAKELE GKWRALQLIE  360
MELSVKKLAL MQEQAKFVLD SMKSSED
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126142KRRAETEPNPKDSKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.12e-24GeBP family protein