PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g626960.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 544aa    MW: 61207.4 Da    PI: 6.7105
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g626960.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS451.94.1e-1381685381374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l+++L+ cA+av+++dl laq+++ +l++++s +g+p+qRl ay++e+L ar a+s+s++ykal+++e +   sse l+++++++ev+P++kf
  Pd.00g626960.m01 168 LKQVLIFCAKAVADNDLLLAQWMMDELRQMVSVSGEPIQRLGAYLLEGLVARRASSGSNIYKALRCKEPA---SSELLSYMHILYEVCPYFKF 257
                       5799*****************************************************************9...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       +++ aN aI ea++ e+rvHiiDf+i+qG QW++L+qa+a+Rp+gpp++RiTg++++ s   +   l+ +g+rL+k+Ae ++vpfef++ +a 
  Pd.00g626960.m01 258 GYMSANGAIAEAMKDENRVHIIDFQIGQGSQWLTLIQAFAARPGGPPHIRITGIDDSMSAyaRGGGLNIVGKRLSKLAELFKVPFEFHA-AAM 349
                       ********************************************************888789999************************.899 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +  +++l++L v+pgEala n++++lh+++desvs++++rd++L+lvkslsPkvv++veqe+++n++ F+ rf+e+l+yy+a+f+s++++lpr
  Pd.00g626960.m01 350 SGCEVQLKHLGVRPGEALAMNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFVETLNYYTAMFESIDVTLPR 442
                       99******************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       +++eri+vE+++l+re+vn++aceg er+erhe l+kWr r+ +aGF+p+pls+ +++++k+ll ++++  yr++e++g+l+lgWk+r Lv+ 
  Pd.00g626960.m01 443 DHKERINVEQHCLAREVVNIIACEGVERVERHELLGKWRLRFAMAGFTPYPLSSLVNATIKTLLDNYSD-KYRLQERDGALYLGWKNRDLVAS 534
                       ********************************************************************5.5********************** PP

              GRAS 371 SaWr 374
                       +aW+
  Pd.00g626960.m01 535 CAWK 538
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 544 aa     Download sequence    
MSNRLYYQPV QEVEAYCLPR FQTLDPQVHY NNENSQSTVF SAQNFHIKYC TLESSAANGS  60
YTVYNSPSTV NFSPNGSPMS QQDSHSHPPP DQYHSPDQNY SSPISGSCIT DDATDFKYKL  120
KQLETVMLGP DSNILDNYCS TFQNGTSNTL PETDSWGQIM DSISKRDLKQ VLIFCAKAVA  180
DNDLLLAQWM MDELRQMVSV SGEPIQRLGA YLLEGLVARR ASSGSNIYKA LRCKEPASSE  240
LLSYMHILYE VCPYFKFGYM SANGAIAEAM KDENRVHIID FQIGQGSQWL TLIQAFAARP  300
GGPPHIRITG IDDSMSAYAR GGGLNIVGKR LSKLAELFKV PFEFHAAAMS GCEVQLKHLG  360
VRPGEALAMN FAFMLHHMPD ESVSTQNHRD RLLRLVKSLS PKVVTLVEQE SNTNTAAFFP  420
RFVETLNYYT AMFESIDVTL PRDHKERINV EQHCLAREVV NIIACEGVER VERHELLGKW  480
RLRFAMAGFT PYPLSSLVNA TIKTLLDNYS DKYRLQERDG ALYLGWKNRD LVASCAWKCK  540
PSTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein