PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g625780.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 457aa    MW: 51128.4 Da    PI: 7.2344
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g625780.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS374.91.1e-114954543374
              GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                        lLl+cAe+v+ ++l +a+ lL ++ el+sp g++ +R+ ayf+ AL++r+ +s+ ++y+ l++++ +  +s++ ++al+ ++ +sP++kfsh
  Pd.00g625780.m01  95 GLLLQCAECVAMDSLDEASDLLPEIAELSSPFGSSPERVGAYFAHALQTRVISSCLGTYSPLTTKTLTLAQSQRIFNALQSYNSISPLVKFSH 187
                       58******************************************************************99*********************** PP

              GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                       +t NqaI +a++ge++vH+iD+di+qGlQWp L++ LasR+++  s+RiTg+gs    s+e le+tg+rLa+fA++lg+pfef++l  k  + 
  Pd.00g625780.m01 188 FTSNQAIFQALDGEDHVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGS----SSELLESTGRRLADFASSLGLPFEFRPLEGKIGSI 276
                       ******************************************************....9**************************98888899 PP

              GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
                        el++L v+p+Ea++V++++  h l+d ++s       +L+l+ sl+Pk+++++eq+++h s+sFl rf+eal+yysalfd+l  +l+++s e
  Pd.00g625780.m01 277 TELSQLGVRPDEATVVHWMH--HCLYDVTGSDLA----TLRLLGSLRPKLITIAEQDLSH-SGSFLGRFVEALHYYSALFDALGDGLGADSLE 362
                       9******************9..888877777777....**********************.899***************************** PP

              GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       r++vE++l+g ei+n++a  g +r+ + + +e+W + l+++GF+pv+l+ + a+qa+lll +++++gy++ ee+g+l lgWkd +L+++SaW+
  Pd.00g625780.m01 363 RHMVEQQLFGCEIRNILAVGGPKRTGEVK-VERWGDELKRVGFRPVSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQ 454
                       ***********************998887.9*************************************************************6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    
MVHHRFLSSI ILIDIRYAAD FTRYFSFLDE ARGFAYRPLI FLHEDQTRRP RPRRRRIIRR  60
RPLLHNRNFS REKTSDERET EPVAEGESAG LRLLGLLLQC AECVAMDSLD EASDLLPEIA  120
ELSSPFGSSP ERVGAYFAHA LQTRVISSCL GTYSPLTTKT LTLAQSQRIF NALQSYNSIS  180
PLVKFSHFTS NQAIFQALDG EDHVHVIDLD IMQGLQWPGL FHILASRSKK IRSMRITGFG  240
SSSELLESTG RRLADFASSL GLPFEFRPLE GKIGSITELS QLGVRPDEAT VVHWMHHCLY  300
DVTGSDLATL RLLGSLRPKL ITIAEQDLSH SGSFLGRFVE ALHYYSALFD ALGDGLGADS  360
LERHMVEQQL FGCEIRNILA VGGPKRTGEV KVERWGDELK RVGFRPVSLG GNPAAQASLL  420
LGMFPWKGYT LVEENGCLKL GWKDLSLLTA SAWQPLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.10.0GRAS family protein