PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g623030.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 239aa MW: 27894.4 Da PI: 8.1291 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.5 | 1.8e-14 | 11 | 57 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT eE +ll ++++ +G g W+ ++++ g+++++k+c++rw++yl Pd.00g623030.m01 11 RAWTREENDLLRQCIENHGEGKWHQVPNKAGLNKCRKSCRLRWLNYL 57 68*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.5 | 4.7e-16 | 63 | 106 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T++E +l+++++k+lG++ W++Ia +++ gRt++++k++w++ Pd.00g623030.m01 63 RGDFTEDEVDLIIRLHKLLGNR-WSLIAGRLP-GRTANDVKNYWNT 106 899*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MEGSNLGVRK RAWTREENDL LRQCIENHGE GKWHQVPNKA GLNKCRKSCR LRWLNYLKPN 60 IKRGDFTEDE VDLIIRLHKL LGNRWSLIAG RLPGRTANDV KNYWNTRLRM DSRLKKVKDK 120 PQETIKAIVI RPQPRSFIKS SNCLSSKEPI SDHIQTVENF STLSQSSPST KNGNDWWETF 180 LDDEDVFEKA TCYGLALEEE EFTSFWVDDM PQLKRQCTNV TEEGLGTSDF SFNVDFWNH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 2e-61 | MYB family protein |